Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1707 |
Symbol | |
ID | 5899162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1797012 |
End bp | 1797923 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641562197 |
Product | polyprenyl synthetase |
Protein accession | YP_001683334 |
Protein GI | 167645671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.219541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.533625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGA CCCGAGAGAT GGACGACCAC GCCGCTTTTC TCCAGAGAGT CGAGGCCCTG CGCGCCGGAG TCGATCGGCG GCTGGCCGAC CTCGCCCCGG CCGTGGGCTC GGCGCCCGAC CGGCTGGTCG AGGCGGTGCG CTACTGCCTG CTGGCGCCCG GAAAGCGCTT CCGCCCGATG GTGACCCTGC TGGCCGCGGC CGAGTGCGGC GCGCCCGAAG GGTCGGCGCT GGACGCGGCC TGCGCCTTCG AGATGATCCA CGCCGCCTCG CTGATTCTCG ACGACCTGCC GGCGATGGAC GACGCCGGCT TGCGGCGGGG CCTGCCGACC ATCCACCGGG CGTTCGACGA GGCCACGGCG ATCCTGGCGG GCGTCGGGCT GCTGAACCAG GCCTATGCGG TGATCGCCGC CGACCAGGGC CTGCCGGGTT CGTTGCGCGC CGAGCTGACG GCCCGCGCCG CCCACGCCGT CGGCTTTTCG GGCCTGATCG CCGGCCAGGC CCGCGACCTG TTCGACCGCG ACCAGATCCG CGACCCGGCG GCGCTCGAAC GCCTCAATCA CGAGAAGACC GGGGTGCTGA TCATCGCCGC CGCCCAGGGC GGCGCGCTGG TCGCCGGCGC GCCCGAAGCC ACGGTCGAGG CGTTTGGAAC CTTCGCCCGC CACATCGGGC TGGCCTTCCA GATCCGCGAC GACCTGATCG ACGCCCAGGG CTCGGCCGAG ACGGCCGGCA AGGACGTCGG CAAGGACGCG GCCATGGCCA CGGTGGTCTC GACCTTGGGC CTGGCGGGAG CCCGCCAAGC CATGGAGGAC CACCTGGCCA AGGCCTCGGG GGCCTTGGCC TCGGTCGGCC GCGGAGACCT TCTGGGCCGC TATGTCGGCG ACCTGTTCGC CAGGCGCAAG GCGGCGGCGT GA
|
Protein sequence | MAATREMDDH AAFLQRVEAL RAGVDRRLAD LAPAVGSAPD RLVEAVRYCL LAPGKRFRPM VTLLAAAECG APEGSALDAA CAFEMIHAAS LILDDLPAMD DAGLRRGLPT IHRAFDEATA ILAGVGLLNQ AYAVIAADQG LPGSLRAELT ARAAHAVGFS GLIAGQARDL FDRDQIRDPA ALERLNHEKT GVLIIAAAQG GALVAGAPEA TVEAFGTFAR HIGLAFQIRD DLIDAQGSAE TAGKDVGKDA AMATVVSTLG LAGARQAMED HLAKASGALA SVGRGDLLGR YVGDLFARRK AAA
|
| |