Gene Caul_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1707 
Symbol 
ID5899162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1797012 
End bp1797923 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID641562197 
Productpolyprenyl synthetase 
Protein accessionYP_001683334 
Protein GI167645671 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.219541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.533625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA CCCGAGAGAT GGACGACCAC GCCGCTTTTC TCCAGAGAGT CGAGGCCCTG 
CGCGCCGGAG TCGATCGGCG GCTGGCCGAC CTCGCCCCGG CCGTGGGCTC GGCGCCCGAC
CGGCTGGTCG AGGCGGTGCG CTACTGCCTG CTGGCGCCCG GAAAGCGCTT CCGCCCGATG
GTGACCCTGC TGGCCGCGGC CGAGTGCGGC GCGCCCGAAG GGTCGGCGCT GGACGCGGCC
TGCGCCTTCG AGATGATCCA CGCCGCCTCG CTGATTCTCG ACGACCTGCC GGCGATGGAC
GACGCCGGCT TGCGGCGGGG CCTGCCGACC ATCCACCGGG CGTTCGACGA GGCCACGGCG
ATCCTGGCGG GCGTCGGGCT GCTGAACCAG GCCTATGCGG TGATCGCCGC CGACCAGGGC
CTGCCGGGTT CGTTGCGCGC CGAGCTGACG GCCCGCGCCG CCCACGCCGT CGGCTTTTCG
GGCCTGATCG CCGGCCAGGC CCGCGACCTG TTCGACCGCG ACCAGATCCG CGACCCGGCG
GCGCTCGAAC GCCTCAATCA CGAGAAGACC GGGGTGCTGA TCATCGCCGC CGCCCAGGGC
GGCGCGCTGG TCGCCGGCGC GCCCGAAGCC ACGGTCGAGG CGTTTGGAAC CTTCGCCCGC
CACATCGGGC TGGCCTTCCA GATCCGCGAC GACCTGATCG ACGCCCAGGG CTCGGCCGAG
ACGGCCGGCA AGGACGTCGG CAAGGACGCG GCCATGGCCA CGGTGGTCTC GACCTTGGGC
CTGGCGGGAG CCCGCCAAGC CATGGAGGAC CACCTGGCCA AGGCCTCGGG GGCCTTGGCC
TCGGTCGGCC GCGGAGACCT TCTGGGCCGC TATGTCGGCG ACCTGTTCGC CAGGCGCAAG
GCGGCGGCGT GA
 
Protein sequence
MAATREMDDH AAFLQRVEAL RAGVDRRLAD LAPAVGSAPD RLVEAVRYCL LAPGKRFRPM 
VTLLAAAECG APEGSALDAA CAFEMIHAAS LILDDLPAMD DAGLRRGLPT IHRAFDEATA
ILAGVGLLNQ AYAVIAADQG LPGSLRAELT ARAAHAVGFS GLIAGQARDL FDRDQIRDPA
ALERLNHEKT GVLIIAAAQG GALVAGAPEA TVEAFGTFAR HIGLAFQIRD DLIDAQGSAE
TAGKDVGKDA AMATVVSTLG LAGARQAMED HLAKASGALA SVGRGDLLGR YVGDLFARRK
AAA