Gene Caul_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1578 
Symbol 
ID5899033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1666560 
End bp1667342 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID641562066 
ProductABC transporter related 
Protein accessionYP_001683206 
Protein GI167645543 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.292703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TCGCCAAACT CGAATGCCCC AAGCTCGAAT GGAAGGGCGT CCGCAAGCGC 
TTTGACAAAG CGCCGATCCT GGATGGGCTG AACCTGAGCG TCGCTTCGGG GCGGTCGCTG
GTGATCATCG GCGGGTCAGG TCAGGGCAAG TCGGTGACCA TCAAGGTCGC CATGGGGCTG
ATGAAGCCCG AGGCCGGCGA GGTGCTGGTC GACGGCAAGG ACCTGCTCGG CATGGGCGGC
GGCTCGCGGC GTAAGCTGTT CTCGCGCATC GGCGTGCTGT TCCAGGGCGC GGCCCTGTTC
GACAGCCTGA CCGTCTGGGA GAACGTCGCC TTCCGTCTGA TCAACGCCGA CGGCGTACCT
CGCAAGGCGG CCAGGGCACG GGCGATCGAG GCGCTGGGCA GGGTGCGCCT GGGCGCGCAG
GTCGCCGACT CCCACCCTTC CGAGCTGTCG GGCGGCATGC AGAAGCGGGT CGGCCTGGCG
CGGGCGGTGG TCGCCAATCC CGAGATCATC TTCTTTGATG AACCCACCAC GGGCCTGGAC
CCGATCACCT CGGCGGCGAT CAACGAGCTG ATCATCGACC AGGTGCGCGG CCTGGGTTGC
ACGGCGGTGT CGATCACCCA CGATCTGGCG TCCGCCCGGA CGATCGGCGA CGAGATCGCC
ATGCTGCACG GCGGCAAGAT CGTCTGGCGC GGCTCGCCCG CCGAACTCGA CAGCACGGAC
AACCCCTATG TGCGGCAGTT CGTCGATGGC AGGGCCGACG GCCCAATGGC GAGCGTGGTC
TAG
 
Protein sequence
MTDIAKLECP KLEWKGVRKR FDKAPILDGL NLSVASGRSL VIIGGSGQGK SVTIKVAMGL 
MKPEAGEVLV DGKDLLGMGG GSRRKLFSRI GVLFQGAALF DSLTVWENVA FRLINADGVP
RKAARARAIE ALGRVRLGAQ VADSHPSELS GGMQKRVGLA RAVVANPEII FFDEPTTGLD
PITSAAINEL IIDQVRGLGC TAVSITHDLA SARTIGDEIA MLHGGKIVWR GSPAELDSTD
NPYVRQFVDG RADGPMASVV