Gene Caul_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1529 
Symbol 
ID5898984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1619891 
End bp1621390 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID641562016 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001683157 
Protein GI167645494 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.417351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.787059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA CGAGCGCCTG GACCAGCGTA CCGCATGACC CGCCGTCGCG TAGCGACTGG 
TCGGCGCGCG CCCGCTATGC GCCGACCGAC TTCGTCACCC TGCTGTGGCG CGAGCGCTTC
TTGATGCTGG GGGTGTTCCT GGCCCTGTTC CTGCTGGGGC TGGCCTTCGC CAGCACGATG
AAAAAGACCT ACACCGCCCA GTCCAGTCTG TTCGTCCGCC TGGGCCAGGA ATATGTCTAC
GAGCCCCGGG CCGGCGACGC CGCCCGCGGC GCGGTGCCCG ACGTCGACCA GGTGATCCAG
TCGGAATCCG AGATCCTGGG CAGCGGCGAA CTGCGCGATC GAGTGATCCG CAAGGTCGGC
TTCGCCAGGA TCTTCCCCGA CGCCGCCCAC AAGTACGCCG CCGCCTCGCC GGAGGGGAAG
CGCAAGCTGA TCGCCGAGGG GCGCGACGCG GTGGGCCGCA ACCTGAAGAT CGAGACCGCC
CCGGACAACT CGATCATCCG GCTGTCCTAT TCCAACGGCG ACGCCGACGT CGCCGAGAAG
GTGCTCAACA CCCTGCTCGA AGAGTACCTG ATCTATCGCC GCAGCCTGCT GATCGGGGCC
GGCGACAACG GGCTGGAGCG CCAGCGCGAA CTGTTCACGC GCAAGCTGGC CGAGACCGAC
ACCGCCTATC AGGCCTTCCT GTCGGGCAAC GACATCGGCG ACTTCACCGC CCAGAAGACC
GCCCTGACCC AGCTGCAGGC CCAGGCCGAG TCCCAGAAAT ACGCCACCGA GGCCCAACTG
CAGGACCGCA TGGGCCGCCT GGCCTCGGTC CAGGCCGAGC TGGCCCGCAC CCCGGCCGAC
ACCGTGCTCT ATCGCGACAG CGACATGTCG GCGTCCGGCA AGCTGGCCCA ACTGAAGCTG
GATCGCGAGG GCCTGCTGTC GCGCTACCGC CCCGACGCCC AACCGGTCCG CGACATCGAG
GCCCAGATCG TCCAGCTGGA GCAGGGCGTC GCCTCGGGCC GCACCGCCGG CGACGGCGCG
CGCCGCAGCG GCCCCAATCC GATCTGGCAG ACCCTGCAGT CCACCCGCAA CGACCTTTCG
GCCGAGGTCG CGGCCCTGCG ACAGTCGCTG GTCGCCTACA CCCAGCAGGT TCAGGACGTG
AACCAGCGCC TGATGCGCCT GTCGGCGCTG GAGCCGACCT TCAACCAGCT CAGCCGCGAC
CGCGATGTGC TGTCGTCCAA CGTCCGCGAC TTCACGGTCA AGGAACAGCA GGACGAGGCC
CAGCGGCAGA TGTCGGCCGA GGGCAGCGAC AATATCCGCA TCGTCCAGCG CGCCGTGGCG
CCGTCGACCG GCAAGAGCCT GAAAAAGCCG ATCATCGTCC TGGCCTTCCT GTTCGCGGCC
TTCACCGCCG CCTGCGCCGG CCTGGTGCGG ATGCTGCTGC GGCCCGGCCT GCAGACCCCG
GCTTCGGCCT CGCGCACCCT GGGCCTGCCG GTCCTGGCCA CGGCCAGCTA CAAGCGCTGA
 
Protein sequence
MSTTSAWTSV PHDPPSRSDW SARARYAPTD FVTLLWRERF LMLGVFLALF LLGLAFASTM 
KKTYTAQSSL FVRLGQEYVY EPRAGDAARG AVPDVDQVIQ SESEILGSGE LRDRVIRKVG
FARIFPDAAH KYAAASPEGK RKLIAEGRDA VGRNLKIETA PDNSIIRLSY SNGDADVAEK
VLNTLLEEYL IYRRSLLIGA GDNGLERQRE LFTRKLAETD TAYQAFLSGN DIGDFTAQKT
ALTQLQAQAE SQKYATEAQL QDRMGRLASV QAELARTPAD TVLYRDSDMS ASGKLAQLKL
DREGLLSRYR PDAQPVRDIE AQIVQLEQGV ASGRTAGDGA RRSGPNPIWQ TLQSTRNDLS
AEVAALRQSL VAYTQQVQDV NQRLMRLSAL EPTFNQLSRD RDVLSSNVRD FTVKEQQDEA
QRQMSAEGSD NIRIVQRAVA PSTGKSLKKP IIVLAFLFAA FTAACAGLVR MLLRPGLQTP
ASASRTLGLP VLATASYKR