Gene Caul_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1277 
Symbol 
ID5898732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1340017 
End bp1340721 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID641561762 
ProductABC transporter related 
Protein accessionYP_001682905 
Protein GI167645242 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.219395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0718068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGAA GTTTTGGGGC CGAAGGCTCC GCCTCCCCCG CTCCCGTGCT GACCCTCGAG 
GCCGTGACCC TCACCCTGCC GTCGGCGGCG GGACCCGTGA ACATTCTGCG CGGCGTGGAT
CTTTCCGTGG CGCCGGGCCA GCGGCTGGCG GTGATCGGCC CCTCCGGCTC GGGTAAGTCG
TCCCTGATCG CGGTCGGGGC TGGGCTTGAG CAGCCGACCT CCGGCGTCGT GCGCCTGTTC
GACCAGGACC TGGCCAGGCT GGACGAGGAC GGCCGCGCCC GTCTGCGACG CGGCCGCGCG
GCCCTGGTCT TCCAGGCCTT CCACCTGCTG CCCAACATGA CCGCCGAGGA GAACGTCGCC
ACCCCGCTGG AAATCGCCGG CGCGAGGGAC GCCCTGACCA CCGCCCGCCA GTGGCTGGGC
CGCGTCGGCC TGTCGGCCCG CCTGACCCAC TATCCGCACC AGCTGTCGGG GGGCGAGCAG
CAGCGCGTGG CCCTGGCCCG CGCCCTCGCC GCCCGCCCCG CCCTGCTGTT CGCCGACGAG
CCGACCGGCA ATCTCGACGC CAAGACCGCC GCCACGGTCG CCGACCTGAT GTTCGCCCTG
GTGGCCGAGG TTGGGGCGGC GCTGGTCATG GTCACCCACG ACCCGGTCCT GGCCGAGCGC
GCCGACCGCA TCGTGCGGAT GGCTGACGGG AAGATCGTCG GCTGA
 
Protein sequence
MVGSFGAEGS ASPAPVLTLE AVTLTLPSAA GPVNILRGVD LSVAPGQRLA VIGPSGSGKS 
SLIAVGAGLE QPTSGVVRLF DQDLARLDED GRARLRRGRA ALVFQAFHLL PNMTAEENVA
TPLEIAGARD ALTTARQWLG RVGLSARLTH YPHQLSGGEQ QRVALARALA ARPALLFADE
PTGNLDAKTA ATVADLMFAL VAEVGAALVM VTHDPVLAER ADRIVRMADG KIVG