Gene Caul_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1229 
Symbol 
ID5898684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1291109 
End bp1291930 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID641561714 
ProductABC-2 type transporter 
Protein accessionYP_001682857 
Protein GI167645194 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.693979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0330448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA TCGCAGACAC CGTCATCCCC CCGCAGCCGC GCGACTATCA CGGCTGGAAC 
TGGAGCGGGT TCTTCACCCT CTATCAGCGC GAGATCCGCC GCTTCTGGAA GGTGGGCACC
CAGACGGTCG CCGCCCCGGT GGTGACCACC CTGCTCTACA TGCTGGTGTT CGTGGTGGCC
GTGGGACCCG GCCGCCAGGC GGTGGGCGGC GTGAGCTTTG GCCATTTCGT GGCCCCCGGC
CTGATCATGA TGGCCATCCT CAACAACGCC TTCGCCAACG CCTCGTCATC CTTGATCCAG
GCCAAGATGA TGGGCCTGAC GCCCGACTTC CTGACCCCGC CGCTGTCGCC GCTGGAGCAG
GTGTCGGCGT TCGGCCTGGG CGCGGCGACG CGCGGCATCG TGGTCGGGGC GGTCACCGCC
CTGGTGATCG GGGTGCTGCC GGGCGCGGGC CTGCAGATCT CGCATCCCTG GGCGATCGTC
TATTTCGCGG TCGGCGCCGC CTTTATCCTG GGCCTGGGCG GGGTGCTGGC CGGTCTGTGG
GCCGAGAAGT TCGACCAACT GGCGGCGGTG ACCAATTTCG TGATCATGCC GATGACCTTC
CTGTCGGGCA CCTTCTACCT GGTCGACCGC CTGCCCGAGC CATTCCGGTC GGCCAGCCAC
TTCAACCCGT TCTTCTACCT GATCGACGGC TTCCGCTACG GCTTCATCGG CCATGCCGAC
GGCTCTGTGG CGATCGGGGC GGCGGTCACG GCCGGGCTTT CGGTGGGGCT GTTCCTGTGG
TGCTGGGCGC TGTTTCGCAG CGGGTATCGG CTGAAGAGCT AG
 
Protein sequence
MKDIADTVIP PQPRDYHGWN WSGFFTLYQR EIRRFWKVGT QTVAAPVVTT LLYMLVFVVA 
VGPGRQAVGG VSFGHFVAPG LIMMAILNNA FANASSSLIQ AKMMGLTPDF LTPPLSPLEQ
VSAFGLGAAT RGIVVGAVTA LVIGVLPGAG LQISHPWAIV YFAVGAAFIL GLGGVLAGLW
AEKFDQLAAV TNFVIMPMTF LSGTFYLVDR LPEPFRSASH FNPFFYLIDG FRYGFIGHAD
GSVAIGAAVT AGLSVGLFLW CWALFRSGYR LKS