Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0646 |
Symbol | |
ID | 5898101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 714434 |
End bp | 715075 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641561128 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001682277 |
Protein GI | 167644614 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.545029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATA TCGCCTACTT CCCTGTCCGT CCGGTCGCGG AGGACAGCCG TCCGGGCAAG CGCGAGCGCA CCAAGGTCGC CAACCGCCAG GCGATCCTCG ACGCCGCGCG GGCGGTGTTC GGCGAGCTGG GCTACGAGTC GGCCACGGTC CGCGACATTA TCCGCCGCAC CGGCTTGGCC TCGGGCACCT TCTACAACTA CTACAAGTCC AAGGAAGAAG TGTTCGACGC CCTGGCCGAC GACGGCGCGC GGCGCTTCCG GCCGATACTG CGGGCCGAAT CCGAGCGGGC GGTCGATTTC GAAAGCTTCC TTCGCGGCGC GATCCGGGCC TATTTCGACT TCCTCGAGGG CGAGCACGAG AGCTGGCGGA TCAACCGGCC GACCGGCGAG GTCTTCCCCC ACGCCCGCGC CACGCCCGAG ATCGTCGCGG TGTTCGACGA AGTCCACGCC GCCTTGGCCA AGGTGCTGGA GCACGACCAC GCCCCGGCCG TGGATCTCGA CTATTTCGCC GCCGCCTGCA TCGCCGTGGC CCGCGAGGTC GGCGACAAGA TGCTGGAGCG CCGGCCCATC GACGTCGAGG GCGCCGCCGA TTTCGCCGTC CGGATGATCC TGGGCGGCCT GCCCGCCTTG CCGCGACCGT GA
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Protein sequence | MSNIAYFPVR PVAEDSRPGK RERTKVANRQ AILDAARAVF GELGYESATV RDIIRRTGLA SGTFYNYYKS KEEVFDALAD DGARRFRPIL RAESERAVDF ESFLRGAIRA YFDFLEGEHE SWRINRPTGE VFPHARATPE IVAVFDEVHA ALAKVLEHDH APAVDLDYFA AACIAVAREV GDKMLERRPI DVEGAADFAV RMILGGLPAL PRP
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