| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0575 |
|---|
| Symbol | |
|---|
| ID | 5898030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 625900 |
|---|
| End bp | 626715 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641561057 |
|---|
| Product | shikimate dehydrogenase substrate binding subunit |
|---|
| Protein accession | YP_001682206 |
|---|
| Protein GI | 167644543 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCTT CCTCGACAAC GCCGCAGATC ACCGGCGCCA CCAAGGTCTG CGCGATCCTG
GCTGATCCCA TCCATCAGGT GCGCACGCCG CAGGCGTTCA ACGCCTTGAT GCGCCAATGG
AACCAGGATG CCGTGCTGGT GCCGTTGCAT GTCGTCCCGG CCAAGCTGGA GACGGCGATC
AGAGGTCTTC GACAGACCGA GAATCTGGCT GGATTTGCGG TGACAGTGCC GCACAAGGCG
GCGGTGCTAA GATGGCTAGA TGAAGCGAGC GCGCACGCTC ACGCGGTAGG AGCCGTCAAC
GTCGTGCGGC GGGAAGCCGA TGGCCGACTG GTCGGTGATG TTCTCGATGG CGTCGGCTTT
GTTGCGGGCC TGCGCCAAAG CGGGATCGAC CTGCGCGGGA TGAACGTCTT CATGGCGGGC
GCGGGCGGCG CGGCCAATGC GATCGCCTTT TCGCTCGCGG CGGCGGGGAT AGCGAGTCTG
GGGATCTGGA ACCGGACCGG TTCCAAGAGC GAGGATCTCC GCGAGCGGCT GCTTCGGTTG
TATCCAGAAT TGCCGATCGC GATCACGAAC AACGATCCGA CCGGCGCTGA CCTGGTCATC
AACGCGACAT CGCTCGGCCT GCGAGAGGGC GACCCGGCGC CGCTGGACCT TGAACGGCTC
CAGGCCCACC AGGTCGTGGC GGAGGTCATC ATGAAGCCTG CCATGACGTC GCTGTTGCTC
GCCGCCGAGG CGCGCGGATG CCAGATTTGC CTGGGGGCGC CGATGCTCGA CTGCCAACTC
ACGCTAATGG CCGAGTTCAT GGGGTTTCGC CCGTAA
|
|---|
| Protein sequence | MTSSSTTPQI TGATKVCAIL ADPIHQVRTP QAFNALMRQW NQDAVLVPLH VVPAKLETAI
RGLRQTENLA GFAVTVPHKA AVLRWLDEAS AHAHAVGAVN VVRREADGRL VGDVLDGVGF
VAGLRQSGID LRGMNVFMAG AGGAANAIAF SLAAAGIASL GIWNRTGSKS EDLRERLLRL
YPELPIAITN NDPTGADLVI NATSLGLREG DPAPLDLERL QAHQVVAEVI MKPAMTSLLL
AAEARGCQIC LGAPMLDCQL TLMAEFMGFR P
|
|---|
| |