Gene Caul_0508 details

Gene Information

• Locus tag: Caul_0508
• Symbol: leuD
• ID: 5897963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Caulobacter sp. K31
• Kingdom: Bacteria
• Replicon accession: NC_010338
• Strand: +
• Start bp: 553966
• End bp: 554589
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641560991
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001682140
• Protein GI: 167644477
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCACGC CTTTCGTCAC CCTGACCGGC ACGGCCGCCG TCCTGCCGCT GGCCAATATC 
GACACGGACA TCATCATCCG CATCGAACGC CTGACCGAAG GCGACCAGAG CCGGCTTGGC 
GAGTACGCCT TTGAATCGCT GCGCTATCGC GACGACGGAT CAGACGATCC CGACTTCCCG 
TTGAACCGCC CAGAATGGCG CGGGGCGCCG ATCCTGCTGG CGGGTCCCAA TTTCGGCTGC 
GGCTCGTCTC GGGAGGGCGC TGTGACCGCC CTGGCCGCGA TGGGGATCCG CTGCGTCATC 
GCGCCCAGCT ACGGCGACAT CTTTTACGCC AACTGCTTCC AGAACGGCCT GCTGCCGATC 
CGCCTGGACA GTGAAGAGAT CGATCGCCTG ATCGCCGCCG CCGAACGTTT GGAGCCCATG 
ACGGTCGATC TGGAGGCCCA GACAGTCGCC GCCGGGGTCA TCGCCGCCCT TCCGTTCGAG 
ATCGACCCCA TGCGCCGTGA GTCCCTGCTG ACCGGCCTGG ACGATCTTGG CCGGACGCTG 
CGCGACGCCG ACTTGATCAA CACCTGGCAG GCCGCCGATT GGCAAGAACG ACCCTGGATC 
TGGCAGACGG AGATTGCGCT GTGA 

 

Protein sequence

MTTPFVTLTG TAAVLPLANI DTDIIIRIER LTEGDQSRLG EYAFESLRYR DDGSDDPDFP 
LNRPEWRGAP ILLAGPNFGC GSSREGAVTA LAAMGIRCVI APSYGDIFYA NCFQNGLLPI 
RLDSEEIDRL IAAAERLEPM TVDLEAQTVA AGVIAALPFE IDPMRRESLL TGLDDLGRTL 
RDADLINTWQ AADWQERPWI WQTEIAL