Gene Caul_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0227 
Symbol 
ID5897501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp244486 
End bp245802 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content69% 
IMG OID641560711 
Productmajor facilitator transporter 
Protein accessionYP_001681862 
Protein GI167644199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.358089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.545029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GACAGACCCA GACCCCCGGC GCGCGCTATC GCTACGTCGT GCTGGCCATG 
CTGATCCTGG TCTACACGCT CAACTTCCTG GACCGGCAGA TCCTCGGCAT CCTGGCCAAG
CCGATCAAGG AGGAGTTCGG GCTCACCGAC GGCCAGTTCG GCCTGATGAG CGGCCTGGCT
TTCGCCCTGC TCTACACCAC CCTGGCCATC CCGATCGCCT GGCTGGCCGA CCGCTTCAGC
CGGGTGTGGA TCATGACCAC GGCCCTGACC CTGTGGAGCG TCTTCACCGC CCTGTGCGGC
TTCGCTGGCG GGTTCTCGGC GCTGTTCCTG GCCCGCATGG GCGTGGGGAT CGGCGAGGCG
GGCGGGGTGG CGCCGGCCTA TTCGATGCTG GCGGACTATT TCCCCAAGCA TCAGAGGGCC
CGGGCCTTGG CCGCCTACGC CTTCGGCATC CCGCTCGGCA CGGCGTCGGG CGCCCTGGTC
GGCGGGCTGC TGGCCGTGCA CTTCGGCTGG CGGACGGCGT TCATCGCCGT TGGCCTGCTG
GGCGTGGTCC TGGCCCCGAT CTTCCGCCTG GTGGTGCGCG ACCCGCGCCG GGGCGGCGCC
GACATGGCGG TTGGCGACAC GACCTCGGTC CAGGCGCCGG CCGCGCCGCT CAAGGACGTG
ATCCGCGTGC TGGCGAGGAA GCCCAGCTTC TGGCTGCTGT CGTTCGGGGC GGCCTCGTCC
TCGGTGTGCG GCTATGGCGT GGCGTTGTGG TTGCCGTCGT TCTTCATGCG CAGCCTGGGC
CTGACCCTGC GCGAGACGGC CTGGTACTAT TCGGGCATCG CCTTCTTCGG CGGGCTGATC
GGCATCTGGC TGGGCGGGGC GGTGGCCGAC CGCCTGGGCG CCAAGTCCAA GGCGGCCTAT
CCCCTGACCC CGGCCGTCGC CTTCCTGATC TCGGTGCCGT GCTTCCTGCT GGCCATGAAC
AGCGGTTCGC TGGTCGGGAA CCTGGGCGGG GGCGCGGCCC TGGCCCTGGC CTTCGCGATC
TTCCTGATCC CCACCGGGCT GAACCTGGCC TGGCTGGGGC CGATCACGGC GGCCGTGCAG
CACCTGGCCC CCGCGCCGAT GCGCACCACG GCCTCGGCCC TGTTCCTGCT GATCAACAAC
CTGCTGGGGA TCGCCGTCGG CACCTACTAT TTCGGCCTGG TTTCCGACCT CCTGAAGCCG
GCTTTCGGCC AGGAATCCCT ACGCTGGTCG ATCTATACCG GCATGGGCTT CTATCTGGTC
GCGGCGCTGC TGTTCTTCCT GGCCTCGCGT CGCCTGGCCA AGGACTGGGT GGACTAG
 
Protein sequence
MSDGQTQTPG ARYRYVVLAM LILVYTLNFL DRQILGILAK PIKEEFGLTD GQFGLMSGLA 
FALLYTTLAI PIAWLADRFS RVWIMTTALT LWSVFTALCG FAGGFSALFL ARMGVGIGEA
GGVAPAYSML ADYFPKHQRA RALAAYAFGI PLGTASGALV GGLLAVHFGW RTAFIAVGLL
GVVLAPIFRL VVRDPRRGGA DMAVGDTTSV QAPAAPLKDV IRVLARKPSF WLLSFGAASS
SVCGYGVALW LPSFFMRSLG LTLRETAWYY SGIAFFGGLI GIWLGGAVAD RLGAKSKAAY
PLTPAVAFLI SVPCFLLAMN SGSLVGNLGG GAALALAFAI FLIPTGLNLA WLGPITAAVQ
HLAPAPMRTT ASALFLLINN LLGIAVGTYY FGLVSDLLKP AFGQESLRWS IYTGMGFYLV
AALLFFLASR RLAKDWVD