Gene Caul_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0198 
Symbol 
ID5897472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp215150 
End bp215599 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID641560682 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001681833 
Protein GI167644170 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0226564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.736075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTA AACTCTCTGG CGGTGGTGGC GGTCGCTACT CCCTCGGTCA GAACTCCGAA 
ATCAACGTCA CCCCGTTCGT CGACATCCTG CTCGTGCTGC TGATCATCTT CATGGTGGCC
GTGCCGATGG CGACCGTGGC GATCAAGGTC GATCTGCCGC CGGCGGTTCC GCCGCCGCCG
AACGCACCCA AGCCGAAGGA GCCGGTGTTC ATCTCGATCC AGAAGTCGGG CGCGCTGTAC
GTTGCTGAAA AGCAAACCAG CCTCGACAAC CTGCAGTTCG ACCTGGACGC CAAGTTCAAC
GCGACTGGCC AGGCCGGTCC GAAGGACGAC CAGCGCGTCA TGGTCCGCGC CGACGCCGAC
GTGACCTATG CCGACTTCAT GGGCGTGCTG AACGCCCTGC AGACCGGCGG CTGGTACAAG
GTCGGCCTGA TCAACGAAGA CATCCACTAA
 
Protein sequence
MAAKLSGGGG GRYSLGQNSE INVTPFVDIL LVLLIIFMVA VPMATVAIKV DLPPAVPPPP 
NAPKPKEPVF ISIQKSGALY VAEKQTSLDN LQFDLDAKFN ATGQAGPKDD QRVMVRADAD
VTYADFMGVL NALQTGGWYK VGLINEDIH