Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0119 |
Symbol | |
ID | 5897831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 130129 |
End bp | 130833 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641560603 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001681755 |
Protein GI | 167644092 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.693979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCCG CGCCGCGGAT CTGGGTCACT CGGGCCTTGC CGGGCGCCGA GGACACCGCC GCGCGCCTTC GCGCCATGGG CCTGCCGCCG CTGGTCGATC CGCTGCTGGC GGTGGTCCCC CTGTCTCCGT CGATCGATCT GGAGGGCGTG GCGGCCCTGG CGTTCACCAG CGTCAACGGC GTGGAGGCGT TCGCCCGCCT GTGCACCGAC CGCGACCGCC CTGTCTTCGC GGTCGGTGAT CGCACCGCCC GCGCCGCCCG CGAGGCCGGC TTCGGCGAGG TGGCCTCGGC CGACGGCGAC GTCGAGGCCC TGGCCGCCCT GATCGTGGGG AGCGCGGCGC GGATCGACGG CGCGGTGTTG CACCCGGGCG CTCTGGAGCC GGCCGGGGAC ATGATCTCGC CCTTGGTCGC GGCCGGCCTG ACCGCGCGGC GTGTCGCGGT CTACGAGACG GTCGAGCGCG ATCCGGACCC CGCCACCCTG GCCGAGCTGG GGACGCTGGC CGTGGTTCTG CTCCATTCGC CGCGTGCGGC GCGCAAGCTG GCGCGGGTGC TGGAAGCCCA CCCCGCGCCG AGCCTTCGAG CCCTGTGCCT GTCGCCGTCC GTGGCCGGAG CGCTCGGGAC GGCGGAGCAA GACGGCCGCC TGGCGTCCGT GGCGTTCGCG CCGCATCCGA CCGAAACCGC GCTGCTCGAT CTGCTGACGG CCTAG
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Protein sequence | MIAAPRIWVT RALPGAEDTA ARLRAMGLPP LVDPLLAVVP LSPSIDLEGV AALAFTSVNG VEAFARLCTD RDRPVFAVGD RTARAAREAG FGEVASADGD VEALAALIVG SAARIDGAVL HPGALEPAGD MISPLVAAGL TARRVAVYET VERDPDPATL AELGTLAVVL LHSPRAARKL ARVLEAHPAP SLRALCLSPS VAGALGTAEQ DGRLASVAFA PHPTETALLD LLTA
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