Gene Caul_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0119 
Symbol 
ID5897831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp130129 
End bp130833 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content75% 
IMG OID641560603 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001681755 
Protein GI167644092 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.693979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG CGCCGCGGAT CTGGGTCACT CGGGCCTTGC CGGGCGCCGA GGACACCGCC 
GCGCGCCTTC GCGCCATGGG CCTGCCGCCG CTGGTCGATC CGCTGCTGGC GGTGGTCCCC
CTGTCTCCGT CGATCGATCT GGAGGGCGTG GCGGCCCTGG CGTTCACCAG CGTCAACGGC
GTGGAGGCGT TCGCCCGCCT GTGCACCGAC CGCGACCGCC CTGTCTTCGC GGTCGGTGAT
CGCACCGCCC GCGCCGCCCG CGAGGCCGGC TTCGGCGAGG TGGCCTCGGC CGACGGCGAC
GTCGAGGCCC TGGCCGCCCT GATCGTGGGG AGCGCGGCGC GGATCGACGG CGCGGTGTTG
CACCCGGGCG CTCTGGAGCC GGCCGGGGAC ATGATCTCGC CCTTGGTCGC GGCCGGCCTG
ACCGCGCGGC GTGTCGCGGT CTACGAGACG GTCGAGCGCG ATCCGGACCC CGCCACCCTG
GCCGAGCTGG GGACGCTGGC CGTGGTTCTG CTCCATTCGC CGCGTGCGGC GCGCAAGCTG
GCGCGGGTGC TGGAAGCCCA CCCCGCGCCG AGCCTTCGAG CCCTGTGCCT GTCGCCGTCC
GTGGCCGGAG CGCTCGGGAC GGCGGAGCAA GACGGCCGCC TGGCGTCCGT GGCGTTCGCG
CCGCATCCGA CCGAAACCGC GCTGCTCGAT CTGCTGACGG CCTAG
 
Protein sequence
MIAAPRIWVT RALPGAEDTA ARLRAMGLPP LVDPLLAVVP LSPSIDLEGV AALAFTSVNG 
VEAFARLCTD RDRPVFAVGD RTARAAREAG FGEVASADGD VEALAALIVG SAARIDGAVL
HPGALEPAGD MISPLVAAGL TARRVAVYET VERDPDPATL AELGTLAVVL LHSPRAARKL
ARVLEAHPAP SLRALCLSPS VAGALGTAEQ DGRLASVAFA PHPTETALLD LLTA