Gene Caul_5223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5223 
Symbol 
ID5897353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp146025 
End bp146372 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content69% 
IMG OID641555326 
Productconjugal transfer protein TrbC 
Protein accessionYP_001676657 
Protein GI167621872 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGC CAGCCGCACA CCGTCCTTGG ACCATGCCCA AGACCCGATC GCTCATCCTG 
GGCCTGGCCT TGGCGACGCT CGCCGCCGAG CCGGCCTTCG CCGGCGGCAC GGGCGGCGGC
ATGCCCTGGG ACAACCTGCT GACCACTATC GCCGACTCCA TCACCGGCCC GGTGGCCAAG
GCGATCGGCG TCATCGCCAT CGCCTTGACC GGTCTGGGCT TTGCGATCTC CGAGGGCGGG
TCCTGGGTGC GCAAGGGCAT GGGGGTGCTC TTTGGCCTGT GCGTGGCCTT CTCGGCCTCG
ACCTTCTTCC TGGGCTGGCT GGGTTTCACC GGCGGGGCGG GCTTTTGA
 
Protein sequence
MSSPAAHRPW TMPKTRSLIL GLALATLAAE PAFAGGTGGG MPWDNLLTTI ADSITGPVAK 
AIGVIAIALT GLGFAISEGG SWVRKGMGVL FGLCVAFSAS TFFLGWLGFT GGAGF