| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5104 |
|---|
| Symbol | |
|---|
| ID | 5897296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | + |
|---|
| Start bp | 20733 |
|---|
| End bp | 21350 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641555207 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001676538 |
|---|
| Protein GI | 167621753 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAC AAACTGAGCG GCTTGCGGCC GCCCGCCATG GCGGTCCATC CGAGATCCGC
GAGCAAATCA TCATCGCCGC CAGCGAGCAT TTCAGTCGCT ACGGCTACGC CAAGACCACC
GTTGCCGACC TGGCCAAGGC CATCGGCTTC TCGAAGGCCT ACATCTACAA ATTCTTCGAT
TCAAAGCAGG CCATCGGCGA GGCGATCTGC GGCCAGTGCC TGGCTCAAAT CTCGGACGCG
GCGCAGGCTG CGGCCGACCA AGGCACGACG GCGACGGAAA AGTATCGCAA GTTTTTCAAG
ACGATAGTGG ACCTTAGCGT TGACCTCTTC TTCAACGATC GCAAGCTCTA CGACATCGCG
GCCCACTCCT TTTCGGAAAA GTGGGCGCCC TCGACGGCCT ACATGGAGCG CATCTACGGC
ATGTTGCGCG AGATCATCCT GTTTGGCCGG GAAACGCGCG AATTCGAGCG CAAGACGCCG
TTGGACGAAA CCTGTCGGGT GATCCTCCAG GTGATGAACC CGCTGACCAA TCCGCTGATG
CTCGAGCACA ATCTCGACGT CATCCCGGAG GCGCCCAACG AGGTGTCGAA TCTGGTTCTG
CGGAGCCTTG CTCCCTAG
|
|---|
| Protein sequence | MTQQTERLAA ARHGGPSEIR EQIIIAASEH FSRYGYAKTT VADLAKAIGF SKAYIYKFFD
SKQAIGEAIC GQCLAQISDA AQAAADQGTT ATEKYRKFFK TIVDLSVDLF FNDRKLYDIA
AHSFSEKWAP STAYMERIYG MLREIILFGR ETREFERKTP LDETCRVILQ VMNPLTNPLM
LEHNLDVIPE APNEVSNLVL RSLAP
|
|---|
| |