Gene Caul_5444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5444 
Symbol 
ID5897149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp157811 
End bp158494 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content56% 
IMG OID641550731 
ProductOmpW family protein 
Protein accessionYP_001672217 
Protein GI167621709 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.230976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA ATGGAGCATA TATGTATGCA AGGCTTGCGC AATACGCCAC CGCGCTCGCC 
GTCTTGAGCG TCTTCCCCCA GGCTGCATTG GCCCAGAATT CGGAAGGATT CAAGCTGTGG
GCCGTAAGTC TGAATGCAAC TAGGGTCTTC GTGGATGAGG ATGCGCCCGA CATCACCTTG
GCTGGAGGGC CTGTTCCGGG CTCGAATGTG AGGATCGGGG ATGCCACGTC GGCGACCATT
GATATCGGAT ATTTCTTCAC GCCCAATGTT GCTGGTAATT TGTTTCTCGG CGTGCCGGCG
ACCGCGCAAA TTGACGGCGC TGGGTCACTT GAGCCGCTCG GAACTCTAGC CAAGGTCAAC
TATGGACCCA TCATCTTGTC GGCCCAGTAC CATTTCAACA ATCTTGGCAA GGTTCATCCC
TATCTGGGAG TGGGCGTCGG GCGGATCGTC TTTCTGAATG AGCGTGACAG AGCTTTGCTT
AATTTCAGTA TCGACGACAG TTGGGCGCCT GCGGCTCAGG TGGGTGTTCG GTACGAGCTT
GGCGCAGAAT GGATGCTGAA CGCTGACGTT CGATACGTTC CCTTCTCCAC GCACGCTACC
GGTTCACTGG GTGGAGCGCC TGTCCGGACA CGTTTGGACA TCGACCCGAT CCTGACGAGC
GCCGGAGTGA CTTACCGGTT TTAG
 
Protein sequence
MRKNGAYMYA RLAQYATALA VLSVFPQAAL AQNSEGFKLW AVSLNATRVF VDEDAPDITL 
AGGPVPGSNV RIGDATSATI DIGYFFTPNV AGNLFLGVPA TAQIDGAGSL EPLGTLAKVN
YGPIILSAQY HFNNLGKVHP YLGVGVGRIV FLNERDRALL NFSIDDSWAP AAQVGVRYEL
GAEWMLNADV RYVPFSTHAT GSLGGAPVRT RLDIDPILTS AGVTYRF