| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5417 |
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| Symbol | |
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| ID | 5873232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6047157 |
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| End bp | 6048380 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641550553 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001671634 |
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| Protein GI | 167036403 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.886931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.408108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTC CAAATAAGAA TTATCGTTGG GTAATTTTAG CTGTGGCTAC TTTTGCACAA
GCTAGCGCTT GTTTTTTCGT TCAAGGCTTT GGGGCTATCG CGTTAAATGT TCAGTCCGAG
ATGGGCCTCA GTAATTGGCA GATCGGCACA TTGGTTTCGG CAGCACAGTT GATTCCGCTT
TTTGGTCTAT TGATTGCTGG CGAGCTATTG GGTAGGTACA GTGAGCGATT TGTTGTTGGT
GTAGGAACAG TAATCGTTGG CGTTTCATTG TGCTGCGCTG CGCTGGCAAA TTCTTACACT
GAATTGCTTA TGATCCTAGT ACTATTAGGT TTTGGATACA GCACGGCTCA GCCCGGAGGA
AGCAAGTCTG TATCTAATTG GTTTCAAGGT AGTCAGCTAG GTTTTGCAAT GGGTATTCGA
CAAGCTGGAT TACCCCTGGG CGGCGCCATG GCCGCGTTAC TACTTCCATT TTTTGCCAGC
CAATACTCTG TTCAAACAGC TTTTTTGGTG GGCGGACTTG TAGCGTTGTT TGGTGCCATC
TTATTTGTTT TGCTGTATAA AAAACCTGAG ATAAGTCAGG GCATCGAAAG AAAAAAAATC
AATCTAAAAT TGGCGGCTGT GTCCCGACTG TCTATGGTAA CCGAACCTGC CATGAGAAAA
ATCATGGTGT CCGGTGCTAG TCTCACTGCC TCACAGTATG CCATTTCAGT CTTCTTAGTT
TTGTATCTTT ATACCTCAGT TGGACTTGAT AGATCTACTG CGACGATGAT GTTCTTCGTG
GTGCTAGGGG CAGGCATAGT CGGAAGGGTT GTCCTAGCGG CTTGGAGTGA TCATTGTGAG
TCAGGAAGGT ACTACCCCGT GATGACTTGT CTCGGTGCGG TAGCGGCCAT ATTGATGCTG
TTACCCTTTT TGAATACAAA AAATTTGTTA ATGCTAAGTG TTTTTATGGC GTTCACTGGT
TTTTTTGCAT ACGGATGGTA CGGTCCATGG GTAGCTTACA TTGCAGAAAC TGCTCCTGCT
GATCGCAAGG GTTTTGCGCT GGGAATGGCC ATGACAGCTA ATCAGCTCTC CGTTGTATTG
ATTCCCCCGA TTATTGGCTT ATCACGGGAT AGCCTTGGTA CCTATGCTTA TGGTTGGGGA
ACTTTAGCAA TAGTATCTGT CATTGTGCTA TTTACTACTT TCAACAGAAA ACAGGGGAAA
TTAGACAAGA GAATGTGCAA TTGA
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| Protein sequence | MNFPNKNYRW VILAVATFAQ ASACFFVQGF GAIALNVQSE MGLSNWQIGT LVSAAQLIPL
FGLLIAGELL GRYSERFVVG VGTVIVGVSL CCAALANSYT ELLMILVLLG FGYSTAQPGG
SKSVSNWFQG SQLGFAMGIR QAGLPLGGAM AALLLPFFAS QYSVQTAFLV GGLVALFGAI
LFVLLYKKPE ISQGIERKKI NLKLAAVSRL SMVTEPAMRK IMVSGASLTA SQYAISVFLV
LYLYTSVGLD RSTATMMFFV VLGAGIVGRV VLAAWSDHCE SGRYYPVMTC LGAVAAILML
LPFLNTKNLL MLSVFMAFTG FFAYGWYGPW VAYIAETAPA DRKGFALGMA MTANQLSVVL
IPPIIGLSRD SLGTYAYGWG TLAIVSVIVL FTTFNRKQGK LDKRMCN
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