Gene PputGB1_5409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5409 
Symbol 
ID5873224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp6038578 
End bp6039204 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID641550545 
Producthypothetical protein 
Protein accessionYP_001671626 
Protein GI167036395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0800973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG CAACTCGGGC TGTGGATATC TTTCAGGTGC ACGGCGATAG CCCGCAAGTT 
CTGGCTGAAG TGCTGCAGGA CGGCGTGAAC CTGGCCGTTT GGCGCCGGCG CCTGCCGGCA
CAGTTACAGG ACTTTTCTGA ATTGGCCATA AGCCTTGGTC AGCCCCTGGC TGATCAGCGG
GTAATCGATG TGGACGAGCA GCAGATGCCA GTACTGCCCG ATCTGCTGCG TGAAGCGTCG
GATTTACTTG GCTATGAGGC CTTCGTTGCC GATGTGACGT GGTTGGTGGC GGCGTACACC
TGCCTGGTTG GCGCACGTCG GGTCGGTTTA CGTCTGCGGG TACTGGACGG TCCTATGTGC
CCGCGCTTCC ATGTGGATAA CGTGCCATTA CGCCTGCTCA CTACCTATGC GGGTCCGGGT
AGTGAATGGT TGCAAGAGCA GGATAGCCGG CGTGGAGAGT TACACACAGC TGATCTTCCT
GTGGATAACA TAAAGCGCCT GCAGCCCGGC GAGGTAGGGA TACTGAAAGG CGAGAAATGG
CAGGGCAACG AGGGCGCAGG CCTGGTGCAT CGGTCCCCTT CAGGGCAACA GGGGCGGCTA
CTGCTCAGCC TTGACTGGCT GGCCTGA
 
Protein sequence
MNAATRAVDI FQVHGDSPQV LAEVLQDGVN LAVWRRRLPA QLQDFSELAI SLGQPLADQR 
VIDVDEQQMP VLPDLLREAS DLLGYEAFVA DVTWLVAAYT CLVGARRVGL RLRVLDGPMC
PRFHVDNVPL RLLTTYAGPG SEWLQEQDSR RGELHTADLP VDNIKRLQPG EVGILKGEKW
QGNEGAGLVH RSPSGQQGRL LLSLDWLA