| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5353 |
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| Symbol | |
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| ID | 5873168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5977397 |
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| End bp | 5978266 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550489 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001671570 |
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| Protein GI | 167036339 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.28982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.261949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC TTTCCGTGAT GGTGGTGGGT TGTGGTGATG TGGGTGGGCG TCTTGCCCTG
CAGATGCTGG CTAAAGGTTG GCAGGTGAGT GGCCTGCGAC GTTCGGTCGA GCAGCTGCCA
GCGGGCGTTC AACCAGTCGC CGCGGACCTG GCCGAGCCTT CGATCCCGCA AGCCTGGCCA
CAAGGCCCAC TGGACTACCT GGTTTACTGC GTGGCGGCCA GCCAGCACGA CGAGGCGGGT
TACCAGGCGG CCTATGTTGA TGGCTTGCGT CATGTGTTGG CCTGGCTGGT TGAGCGTGGC
CAGCGCCCGC GTCGGCTGCT GTTCGTCTCC AGCAGCAGCG TGTATGCGCA GAAGGATGGC
GAGTGGATCG AGGAAGGCGC GGCCACCGAA CCGGAGGGCT ATTCCGGGCG GGTGATGCTG
GAGGCGGAAC AGCTGGCGCG GGCCAGTGGC ATCCCGGCGA GCGTGGTGCG CCTGACCGGT
ATCTATGGCC CAGGCCGCGA GTGGCTGTTG AGCCAGGTTC GCCAGGGCTA CCGTGTGGCC
GAGGAGCCGC CGCTGTATGG CAACCGCATT CATGCCGAGG ATGCTGCCAG CCTGCTGGCG
TTTCTGCTGC AGGCTGATGC CGATGGCATG GCGCTGGACG AATGCTACAT CGGTGTCGAC
GACGACCCTG CGCCGCTGGC CGATGTGGTG GCCTGGCTGC GGGCGTACAT GGGCGTTACC
GAGTGGTCCG ATGAGCAGCG GGTACGGCGC ACCGGCAGCA AGCGCTGCAG CAATGCCCGG
GCGCGCGCGT TGGGCTGGGC GCCGGTGTAC CCAAGTTACA AGGAAGGCTA TGCCGCGATC
CTTCAAGGAA AAAATCAGTC TCAGGCCTGA
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| Protein sequence | MSDLSVMVVG CGDVGGRLAL QMLAKGWQVS GLRRSVEQLP AGVQPVAADL AEPSIPQAWP
QGPLDYLVYC VAASQHDEAG YQAAYVDGLR HVLAWLVERG QRPRRLLFVS SSSVYAQKDG
EWIEEGAATE PEGYSGRVML EAEQLARASG IPASVVRLTG IYGPGREWLL SQVRQGYRVA
EEPPLYGNRI HAEDAASLLA FLLQADADGM ALDECYIGVD DDPAPLADVV AWLRAYMGVT
EWSDEQRVRR TGSKRCSNAR ARALGWAPVY PSYKEGYAAI LQGKNQSQA
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