Gene PputGB1_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5352 
Symbol 
ID5873167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5976461 
End bp5977255 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID641550488 
Productlipoprotein 
Protein accessionYP_001671569 
Protein GI167036338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.106911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.257814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCC TGGTGACGGG CGCCCTGCCC GTCACCCTCT CTCCTCTGCA AGGTCAACCC 
GTCATGCGTC AAGCACTGCC CCTCGCGCTG GCAGCCCTGC TACTGGGCGG CTGCGCCAGC
CACAAACCCG AAGATTTCAA CGGCACCTGG ATCAACCAGG ACGCCATCAC TGCGGCGGTC
AAAGGCGGCA GCCTGCGCCA AGCACTGAAC GAGCACGGCC CGGTATTCGA GTGGAAACTC
GACGTTGCCA GCCAGCAAGC CAGCTACAGC AATGGTTTCG AGGCCGCTGA CGGCCAGTTG
AGCGCCAATG ACAAGCAATG GCAGGCCAGC TTCGAGGGCG GCCAGACCGA GCAGTTGTCG
CTTGATGGTG ACGCGTTGCT GGCTGTCGAC CAGCGCGGCG CCAAGCAGAC CTTCGTGCGT
GCCAAGGCGC CAGCTGCAGC CAATGCGCCA CTGGGCAGCA GCTTCGAAAA GGCGCTGTAC
CAGGCTTACC TGGGCGGCGA CTGGAAGATC GTCGAAGGCC AGGGCAAAGG TGCCAATGTA
CGTTTCAGCG ACACCGGTAG CGTCACCGGC CTGCCCGGTC CGGACCGCTT CGCCCTGTGC
CTGGCGGGCG ATTGCGCAAC CATGGGCGGC AGCAATGACA GCCTGTGGCT GGAGCGCAAC
CAGCGTGGTG CACCGTTCAT CATCAAGCGT GATGGCGACA AGCTGGAGAT TTTCCAGGCG
GTTAACCGTG CTCAGCCGGA CGACATGCCG GAACTGGCAG CAGGCAAGCG TCAGTGGGTG
CTGGAGCGCA GCTGA
 
Protein sequence
MMPLVTGALP VTLSPLQGQP VMRQALPLAL AALLLGGCAS HKPEDFNGTW INQDAITAAV 
KGGSLRQALN EHGPVFEWKL DVASQQASYS NGFEAADGQL SANDKQWQAS FEGGQTEQLS
LDGDALLAVD QRGAKQTFVR AKAPAAANAP LGSSFEKALY QAYLGGDWKI VEGQGKGANV
RFSDTGSVTG LPGPDRFALC LAGDCATMGG SNDSLWLERN QRGAPFIIKR DGDKLEIFQA
VNRAQPDDMP ELAAGKRQWV LERS