| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5305 |
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| Symbol | |
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| ID | 5873120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5923948 |
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| End bp | 5925930 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550441 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001671522 |
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| Protein GI | 167036291 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.683105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGG ACCGCAACGA CAAGACCCGT CGCCAGTTCC TCGCCACCAG CACCGTGCTC
GGTGCCGCCG GCGCGCTCTG GTCCGCATTG CCCTTCACCG GCCAAGCCGG TTCAGCTCAC
GCATCCAGCC AAGGAGGTTC CATGTCCGCC GACCTGATTC TGTTCAACGG CAAACTACAC
ACCGTTGACC GTGAAAAACC TACCGCGACT GCTGTCGCCA TCAAGGATGG CCGCTTCGTC
GCCGTGGGCA ACGATGCCGA GGCCATGGCC CACAAGGGGG CAGCCACGCA AATCATCGAC
CTCAAACAGC GCACGGTGAT CCCAGGCCTG AACGACTCGC ACCTGCACTT GATCCGCGGC
GGCCTGAACT ACAACCTGGA GTTGCGCTGG GAAGGCGTGC CGTCGGTGGC TGATGCCTTG
CGCATGCTCA AGGACCAGGC CGCACGCACG CCTACGCCGC AGTGGGTGCG TGTGGTCGGT
GGCTGGAACG AATTCCAGTT CGCCGAGAAA CGCATGCCGA CCCTGGAAGA GATCAACCAG
GCCGCGCCCG ACACCCCGGT GTTCCTGCTG CACCTTTACG ACCGCGCACT GCTCAACCGC
GCGGCACTCA AGGCTGTTGG CTACTCCAAG GACACGCCGA ACCCGCCGGG TGGTGAAATC
CAGCGGGACA AGTTCGGCAA CCCGACCGGC ATGCTGATCG CCCGCCCCAA TGCAATGATC
CTCTACGCCA CGCTGGCCAA GGGGCCGAAG CTGCCACTGG AGTACCAGGT CAACTCCACC
CGCCAGTTCA TGCGTGAACT CAACCGCTTG GGCCTGACCA GTGCCATCGA CGCCGGTGGC
GGCTACCAGA ACTTCCCCGA CGACTACTCG GTGATCCAGG AGCTGGCCGA CAACAACCAG
CTGACCGTGC GCATTGCCTA CAACCTGTTC ACCCAGAAGC CCAAGGAAGA ACTGGACGAC
TTCAAGAAGT GGACCGCCAG CGTCAAGCTG CACAGCGGCA CCGACTTCCT GCGCCATAAC
GGCGCCGGTG AAATGCTGGT GTTCTCGGCC GCCGACTTCG AAGACTTCCT CGAGCCGCGC
CCGGACCTGC CACAGACCAT GGAGGAAGAG CTGGAGCCGG TGGTGCGCCA CCTGGTCGAG
CAACGCTGGC CATTCCGCTT GCACGCCACC TACAACGAAT CGATCACGCG GATGCTCGAC
GTGTTCGAGA AGGTCAACCG CGACATCCCG TTCAACGGCC TGCCGTGGTT CTTCGACCAC
GCCGAAACCA TCACCCCGCA GAACATCGAG CGCGTGCGCG CCTTGGGCGG TGGTATCGCC
GTCCAGGACC GCATGGCCTT CCAGGGTGAA TATTTCGTCG ATCGCTACGG CGCCAAGGCG
GCTGAGCAGA CCCCGCCAAT CAAGCGCATG CTCGACATGG GCGTGCCGGT GGGCGCTGGT
ACCGACGCCA CCCGTGTGTC CAGCTACAAC CCGTGGACCT CGCTGTACTG GCTGGTCAGC
GGCAAGACCG TTGGCGGCAT GGCGCTGTAC CCGGAAGGCC TGAGCCGCGA TACCGCGCTG
CAGCTGTTTA CCCAGGGCAG TGCCTGGTTT TCCAGCGAAC AGGGCAAGAA GGGCCAGATC
AAAGTGGGCC AGTTGGCCGA CCTGGCGGCG TTGTCGCTGG ACTTCTTCAG CGTCGATGAA
GAGGCGATCA AGGGCATCGA GTCGGTGCTG ACGATCGTCG ATGGCAAGGT GGTGTACGGC
GCAGGTGAGT TCGACAAACT GGGCCCGCCG CAGGTGCCTG TGTTGCCGGA ATGGTCGCCG
GTGGTCAAGG TGCCGGGGCA CTGGCGCGTC GGTACGCCAT CGTTGGCCGC CGCCGTGCAC
CAGTGCAGCG GGCCATGCGG GGTGCATGCG CACAGCCATG AGAAAGCGCG GCATTCGAGC
GTACCGGTGA ATGACTTCCA GGGCTTCTGG GGTGCGCTGG GTTGTTCATG CTTTGCTTTC
TAA
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| Protein sequence | MSQDRNDKTR RQFLATSTVL GAAGALWSAL PFTGQAGSAH ASSQGGSMSA DLILFNGKLH
TVDREKPTAT AVAIKDGRFV AVGNDAEAMA HKGAATQIID LKQRTVIPGL NDSHLHLIRG
GLNYNLELRW EGVPSVADAL RMLKDQAART PTPQWVRVVG GWNEFQFAEK RMPTLEEINQ
AAPDTPVFLL HLYDRALLNR AALKAVGYSK DTPNPPGGEI QRDKFGNPTG MLIARPNAMI
LYATLAKGPK LPLEYQVNST RQFMRELNRL GLTSAIDAGG GYQNFPDDYS VIQELADNNQ
LTVRIAYNLF TQKPKEELDD FKKWTASVKL HSGTDFLRHN GAGEMLVFSA ADFEDFLEPR
PDLPQTMEEE LEPVVRHLVE QRWPFRLHAT YNESITRMLD VFEKVNRDIP FNGLPWFFDH
AETITPQNIE RVRALGGGIA VQDRMAFQGE YFVDRYGAKA AEQTPPIKRM LDMGVPVGAG
TDATRVSSYN PWTSLYWLVS GKTVGGMALY PEGLSRDTAL QLFTQGSAWF SSEQGKKGQI
KVGQLADLAA LSLDFFSVDE EAIKGIESVL TIVDGKVVYG AGEFDKLGPP QVPVLPEWSP
VVKVPGHWRV GTPSLAAAVH QCSGPCGVHA HSHEKARHSS VPVNDFQGFW GALGCSCFAF
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