| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5250 |
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| Symbol | |
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| ID | 5873064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5866485 |
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| End bp | 5868158 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550386 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001671468 |
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| Protein GI | 167036237 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC CCGACAGCCC GGCACTCGAC CTCAACTGCG TGCTCGAAGC TCTGCTCGCC
GACCAGCGCT TGCATGCCAA CGACACCTTG CAAGTACTCG AACACGCCAC CACCCACCCC
ACAGGCCACC CGCTGGAGCA GATCGCTGCT TGCAGCCTGG AAGACCGCCA CCACACCGGC
CAACCCCTGG ACCTGGACCA CCTCTGCCAA TGGCTGGCCA ACAAGGTTGG CCAGCCCTAC
TTGCGCATCG ACCCCATGCA ACTCGACCTG CCCCAGGTCG CCGGCTTGAT CTCCCCTGCC
TTCGCCCAGC GCCATGGCAT TCTCATCGTC GCCGCCGATG CGTCCAGCGT TACCGTCGCC
AGCGCCCAGC CCTATCAGGA TGACTGGCAG GCAGACCTGG CCCGTAGCCT CGGCAGATCG
GTTCGGCGCG TGCTGGCCAG CCCGCTACAG ATCCGCCAGT CCGGGCAGTC GTTTCAGCAT
CTGGCCCAAT CGGTAAAAGG CGCGCAGTAC CAGCAGTCGA CGAGCCTGGG CGAACTCGAG
CAATTGCTGG AACTGGGCAA GCGCCAGGCC GAGGCCGGTG CCGACGACGC GCACATCGTG
CATATCGTCG ATTGGCTGCT GCAGTACGCC ATTGAACAGC GCGCCAGCGA TGTCCACTTG
GAGCCCCGCC GCGAACAGGG CCAGCTGCGT TACCGCATTG ACGGCCTGTT GCACACTGTC
TATGCCTTCC CAGCCAGCGT CACCCTGGCG CTGGTCAGCC GCCTGAAACA CCTGGGCCGC
ATGGATGTGG CAGAAAAGCG CCGGCCGCAG GACGGTAGAC TGCAAAGCCG CCTGCCAGGC
GGCGGTGAAG TGGAGCTGCG GCTATCCACC CTGCCCACCC CGTTTGGCGA AAAACTGGTG
CTGCGCCTGT TCGACCCGCA GCAGCTGCAG GAGGGCTTCG ACCACCTCGG CCTGCAAGGC
CAGCAATTGG CCCAGTGGCA AGGCCTGCTG CACCAGCGCC AGGGCATTAT CCTGGTGACT
GGCCCCACCG GTTCCGGCAA GACCAGCACC CTATACGCCA GCCTCAAGCT GCTGGCCACG
CCGCAGGTCA ACCTGTGCAC CATCGAAGAC CCCATCGAGC GCCTCGACCC TGCCTTCAAC
CAGCTGCAGG TGCAGCCCGC GCTGGACCTG GGTTTTGCCA ACGGCGTGCG GGCCATGCTG
CGCCAGGACC CGGATATCAT CATGATCGGC GAAATCCGTG ACCGCGAAAC CGCCCTGGTG
GCGGTGCAAG CTGCACTGAC CGGGCACCTG GTGCTGTCGA CCCTGCATAC CAACGATGCT
TGCGCAGCAA TCACACGCTT GCTTGAGCTG GGCGTAGCCG ACTACCTGAT CAAGGCGACG
CTGATCGGGG TCATGGCCCA ACGCCTGGTG CGCACCGTGT GCACGGACTG CCAGGCACGT
TCATCAGCCA CTTGCCAAAC CTGCCGAGGC ACCGGTTTTC ATGGGCGCAC GGGCTTGTTC
GAGCTGTTGC AGCCCAGCGA AAGCCTGCGT GCATTGATCG GTCCTCACGC CGACCTGGCA
CATTTACGGC GCCAGGCACT GGCCGACGGC CTGGTTGACC TGCGTCGCTG CGGAGAAGCA
AAGGTGGCTA GCGGACAGAC CCGTGCGGAG GAAGTGCTAC GCGTCTGTAA CTGA
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| Protein sequence | MHTPDSPALD LNCVLEALLA DQRLHANDTL QVLEHATTHP TGHPLEQIAA CSLEDRHHTG
QPLDLDHLCQ WLANKVGQPY LRIDPMQLDL PQVAGLISPA FAQRHGILIV AADASSVTVA
SAQPYQDDWQ ADLARSLGRS VRRVLASPLQ IRQSGQSFQH LAQSVKGAQY QQSTSLGELE
QLLELGKRQA EAGADDAHIV HIVDWLLQYA IEQRASDVHL EPRREQGQLR YRIDGLLHTV
YAFPASVTLA LVSRLKHLGR MDVAEKRRPQ DGRLQSRLPG GGEVELRLST LPTPFGEKLV
LRLFDPQQLQ EGFDHLGLQG QQLAQWQGLL HQRQGIILVT GPTGSGKTST LYASLKLLAT
PQVNLCTIED PIERLDPAFN QLQVQPALDL GFANGVRAML RQDPDIIMIG EIRDRETALV
AVQAALTGHL VLSTLHTNDA CAAITRLLEL GVADYLIKAT LIGVMAQRLV RTVCTDCQAR
SSATCQTCRG TGFHGRTGLF ELLQPSESLR ALIGPHADLA HLRRQALADG LVDLRRCGEA
KVASGQTRAE EVLRVCN
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