| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5234 |
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| Symbol | |
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| ID | 5873048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5847826 |
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| End bp | 5848893 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641550370 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001671452 |
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| Protein GI | 167036221 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC TGTTGCTGAT GCTGTCAGCC GGCGTGCTGC TAGTGGGCTG CAGTAGCGAG
GACGAGGCAC CCGAGCCGAT TCGGCCGGTG CTGTCGGTCA AGGTCGAACC CCAGGTGCAA
TCGCAGCTGG GCCGCTTCGC CGGCAGTATC CAGGCGCGCT TCGAAAGCAC CCTGGGCTTT
CGGGTTTCCG GGCGCATTGC CCGGCGCTGG CTGGATGTCG GTGCCCAGGT GAAGCCGGGC
GACACCCTGG CCACCCTCGA CCCGACCGAC CAGCAGAACC AGTTGCGTGC CGCCGAAGGC
GACCTGGCCA AGGTGCAGGC ACAGTGGATC AACGCCCAGG CCGATGCCCG TCGCCAGCAA
CAGCTGTATG ACCGTGGCGT GGGCGCCCAG GCCCAGCTGG ACATCGCCCA GACCAACCTG
AAAACCACCA GCGCGGCGTT GGAGCAGGCG CGCTCCGCGC TCAGCCAGGC CCGTGACCAG
CTCGACTACA GCACCCTGCG CACCGACCAC GCCGCCGTGA TCACCGCGTG GCAGGCCGAA
GCCGGGCAAA CCGTTACCGC CGGGCAAGCC GTGGTGACCC TGGCCCGGCC GGACGTGAAG
GAGGCGGTGA TCGACCTGCC GATCGGCCTG GCCGAGCAGT TGGACAAAGG CCTGACCTTT
ACCGTTGCCT CACAGCTCGA CCCAACCATC AATACCACGG CCAGCCTACG CGAGCTGGAG
CCCCAGGCCG ACGCCACCAC CCGTACCCGG CGCGCCCGCC TGACCCTGGC CAGCACGCCG
GCGGCGTTCC ACTTGGGCAC TGCCATCAGC GTGACCCTGA GTTCGGAAGT GACGCCGCGT
AGCGAGCTGC CCGCGAGCGC GTTGCTGGAG CGTGACGGCA AGACTCAGGT GTGGGTGATC
GATACACAGC AGAAGACCGT GGCAACCCGT GACGTGGCGC TGATCGACCG CACCGCCGAC
AGCATTGTCC TGACGTCGGG CGTACAGCCC GGTGAGCGCG TGGTTACCGC AGGTGTGAAC
AGCCTGAAGC CTGGCCAGAA GGTCACCTTC GACGAGGATG CGCAATGA
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| Protein sequence | MKRLLLMLSA GVLLVGCSSE DEAPEPIRPV LSVKVEPQVQ SQLGRFAGSI QARFESTLGF
RVSGRIARRW LDVGAQVKPG DTLATLDPTD QQNQLRAAEG DLAKVQAQWI NAQADARRQQ
QLYDRGVGAQ AQLDIAQTNL KTTSAALEQA RSALSQARDQ LDYSTLRTDH AAVITAWQAE
AGQTVTAGQA VVTLARPDVK EAVIDLPIGL AEQLDKGLTF TVASQLDPTI NTTASLRELE
PQADATTRTR RARLTLASTP AAFHLGTAIS VTLSSEVTPR SELPASALLE RDGKTQVWVI
DTQQKTVATR DVALIDRTAD SIVLTSGVQP GERVVTAGVN SLKPGQKVTF DEDAQ
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