Gene PputGB1_5187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5187 
Symbol 
ID5873001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5800033 
End bp5800581 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID641550323 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001671405 
Protein GI167036174 
COG category[R] General function prediction only 
COG ID[COG4341] Predicted HD phosphohydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR03276] phosphonate degradation operons associated HDIG domain protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTC CAGCCCAGAT CATCGATAGC ACCTTTGCCC TGTACGCGCG CCATGGCAGC 
GACGACTACA TCGGCGAAGC CATCACCCAG CTCGAGCACA TGTCCCAAGC CGCGCAACTG
GCCATGGCCG AAGGCTTCGA CGATGAAGTG GTGCTGGCGG CGTTCTTCCA CGACATCGGC
CATCTGTGTG GTGGTGACGC CAGCATGGGC GGTTACGGCG TGGTCAGCCA TGAACGCATC
GGCGCCGAAT ATTTGCGCCG TTGTGGTTTT GGCGAGCGCA TGGCGCGGCT GGTGCAGTAT
CACGTGGAGG CCAAGCGTTA CCTGACTTTG CGGCAAGCGG GGTATTACCA GCGGTTGAGT
GAAGCGAGCA GGCGCACCCT GGAGTATCAG GGCGGCATGA TGAGCGAGGC CGAGGCGGAT
GCGTTCGAGC GGGATCCGCT GTTCGAGGTC AGCCTGCGGA TGCGGGAATG GGATGAAATG
GCCAAGGAAA TTGGAATGCC AGTGGTTGAT CTGGAGGGAT TGAAGCAGAA GGCGCTGGCA
CTCCTTTGA
 
Protein sequence
MPTPAQIIDS TFALYARHGS DDYIGEAITQ LEHMSQAAQL AMAEGFDDEV VLAAFFHDIG 
HLCGGDASMG GYGVVSHERI GAEYLRRCGF GERMARLVQY HVEAKRYLTL RQAGYYQRLS
EASRRTLEYQ GGMMSEAEAD AFERDPLFEV SLRMREWDEM AKEIGMPVVD LEGLKQKALA
LL