Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5187 |
Symbol | |
ID | 5873001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5800033 |
End bp | 5800581 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550323 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001671405 |
Protein GI | 167036174 |
COG category | [R] General function prediction only |
COG ID | [COG4341] Predicted HD phosphohydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03276] phosphonate degradation operons associated HDIG domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACTC CAGCCCAGAT CATCGATAGC ACCTTTGCCC TGTACGCGCG CCATGGCAGC GACGACTACA TCGGCGAAGC CATCACCCAG CTCGAGCACA TGTCCCAAGC CGCGCAACTG GCCATGGCCG AAGGCTTCGA CGATGAAGTG GTGCTGGCGG CGTTCTTCCA CGACATCGGC CATCTGTGTG GTGGTGACGC CAGCATGGGC GGTTACGGCG TGGTCAGCCA TGAACGCATC GGCGCCGAAT ATTTGCGCCG TTGTGGTTTT GGCGAGCGCA TGGCGCGGCT GGTGCAGTAT CACGTGGAGG CCAAGCGTTA CCTGACTTTG CGGCAAGCGG GGTATTACCA GCGGTTGAGT GAAGCGAGCA GGCGCACCCT GGAGTATCAG GGCGGCATGA TGAGCGAGGC CGAGGCGGAT GCGTTCGAGC GGGATCCGCT GTTCGAGGTC AGCCTGCGGA TGCGGGAATG GGATGAAATG GCCAAGGAAA TTGGAATGCC AGTGGTTGAT CTGGAGGGAT TGAAGCAGAA GGCGCTGGCA CTCCTTTGA
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Protein sequence | MPTPAQIIDS TFALYARHGS DDYIGEAITQ LEHMSQAAQL AMAEGFDDEV VLAAFFHDIG HLCGGDASMG GYGVVSHERI GAEYLRRCGF GERMARLVQY HVEAKRYLTL RQAGYYQRLS EASRRTLEYQ GGMMSEAEAD AFERDPLFEV SLRMREWDEM AKEIGMPVVD LEGLKQKALA LL
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