| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5165 |
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| Symbol | |
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| ID | 5872980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5776924 |
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| End bp | 5778225 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550303 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001671385 |
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| Protein GI | 167036154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.491422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GCCCCTCCCC ACCCTTGCCG GCAAGCTCGG TAAGTGCGTT CACCCTTGCC
AATGGCCTGC GCGTCTATCT ACGCGAAGAC CACCGCGCGC CGCTGGTCAG CGCGCAGTTG
TGGTATCACG TCGGCTCCAG CTACGAGCCA GAAGGCCACA CTGGCCTTTC CCATGCCCTG
GAGCACTTGC TGTTCGAGGG CAGCAGCAAA CTGGCTGCTG GCCAGTATTC AGCCCTGATG
ACCCTTTTGG GAGGAGAGCC GAATGCGTTC ACCGGCGCCG AGGCTACCGT CTTTCCACTG
ACACTGCCTG CCAGTCGCCT GGAAATCGCC CTGGAGGCAA TGGCCGACAT CATGGCCAGC
GCCACGCTCA GCGCTTCTCC TTTCGCTCGA GAGCTGGCAG TGGTCATGGC AGAACGACGA
GAGGATGTCG ACAACAACCC TTTGGCACTG GCAATGGAAC ATCACCTGTT GCTGGCCTAT
GGCAACAACG GTTATGGCAC CCCGGTGATC GGCCACGCTA CCGATCTCGG CCATATGACC
CTGGCTGCCG CACGCACCTG GTACCAAACC TGGTACCACC CCAACAATGC TACGCTCGCG
GTGGCCGGCA ACGTTACCCT GCCACAGCTG CAAACGCTGG TGGCGCGGCA CTTTGCAGCG
ATCCCCGCTC ATCGCCTGCC TGTACAGCAA GTACCTACTA CGCCCTCTGG GCAGGTCCGG
CGCTGCCAGA CCCTGCATTT GCAAGGTCTG AACACAGCCG TGATCATCAG TTTCAACCTC
CCCAGCCAAT GCACCGCCAG CTCTAGCAGC CAAGCCTATG CACTGCGTTT GCTTCCCGAA
ATGCTTGCCC AAGGCTATGC CAGCATCCTG CAGCGCAACC TGGTGCTGAA TGAACCGCTT
CTGCAAAGTT TGACGTCGAG ATATGAACCC TGGCGGCGCG GTGACAGCCT GTTGACCCTT
TACGCGTTCT GCAGCCCGCA GGTAACGCCG GAGGCCGCCG CCGAAAGGCT TACGCTCGAA
ATCGAAACGT TCCGCCAGTC GATACCGGCC ACCGCAGACC TCAAGCGCGC CAAAGCGCGC
TTGATAGCCC GGCAGGTGTT CGAACGCGAT GACATCGCAA AACAGGCACA TTTCATTGGC
ATGCAGGCCA CCTGCGGCCT GGACCCGGTT GCGCTGGAGG ATGAGCGTCA AGCCATCGAA
GCCGTGACAG CCGAGCAGGT CGCAGAGACC GCGCATGCAT TCCTCACCGA GGCGCGCACA
GCAATCACCT TCATGCATCA CAAGGAAAGT GCCGATGAAT AA
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| Protein sequence | MTERPSPPLP ASSVSAFTLA NGLRVYLRED HRAPLVSAQL WYHVGSSYEP EGHTGLSHAL
EHLLFEGSSK LAAGQYSALM TLLGGEPNAF TGAEATVFPL TLPASRLEIA LEAMADIMAS
ATLSASPFAR ELAVVMAERR EDVDNNPLAL AMEHHLLLAY GNNGYGTPVI GHATDLGHMT
LAAARTWYQT WYHPNNATLA VAGNVTLPQL QTLVARHFAA IPAHRLPVQQ VPTTPSGQVR
RCQTLHLQGL NTAVIISFNL PSQCTASSSS QAYALRLLPE MLAQGYASIL QRNLVLNEPL
LQSLTSRYEP WRRGDSLLTL YAFCSPQVTP EAAAERLTLE IETFRQSIPA TADLKRAKAR
LIARQVFERD DIAKQAHFIG MQATCGLDPV ALEDERQAIE AVTAEQVAET AHAFLTEART
AITFMHHKES ADE
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