| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5097 |
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| Symbol | |
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| ID | 5872912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5694339 |
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| End bp | 5695793 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550235 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_001671317 |
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| Protein GI | 167036086 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.813592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA TCGTCAAAGT CTTCCCAGAA ATCACCATCA AGAGCCGGCC GGTGCGCAAG
CGTTTCATCC GCCAGCTCGC CAAGAACATC CGCAACGTGC TCAAGGACCT CGATCCTGAG
CTCGCGGTCG ATGGTGTCTG GGACAATCTC GAAGTGGTCA CCCGCATCGA GGACGAAAAA
GTCCAGCGCG AGATGATCGA GCGCCTCACC TGCACGCCGG GTATCACCCA CTTCCTGCAG
GTAGAGGAAT ACCCGCTGGG TGACTTCGAC GACATCGTCG CCAAGTGCAA GCACCACTTC
GGTCACCTGC TGGCCGGCAA GCACTTCGCC GTGCGCTGCA AGCGCGGTGG CCACCATGAC
TTCACCTCGA TGGACGTCGA CCGTTACGTC GGCAGCCAGC TGCGCCAGCA GTGTGGCGCC
GCCGGCATCG AGCTGAAGAA GCCCGAAGTG CTGGTGCGCA TCGAAATCCG CGACCAGCGC
CTGTACGTCA TCCACAACCA GCACCAGGGC ATCGGCGGTT ACCCGCTGGG CGCCCTGGAG
CAGACCCTGG TGCTGATGTC CGGTGGCTTC GACTCCACCG TGGCGGCTTA CCAGATGATG
CGCCGTGGCC TGATGACCCA CTTCTGCTTC TTCAACCTCG GCGGCCGTGC CCACGAGCTG
GGCGTGATGG AAGTGGCCCA CTACCTGTGG AAAAAGTACG GCAGCAGCCA GCGCGTGCTG
TTCATCAGCG TGCCGTTCGA AGAGGTGGTT GGCGAGATCC TCAACAAGGT CGACAACAGC
TACATGGGTG TGACCCTCAA GCGCATGATG CTGCGCGGTG CCGCGCACAT GGCCGACCGC
CTGGAAATCG ACGCGCTGGT GACCGGCGAG GCGATCTCCC AGGTATCCAG CCAGACCTTG
CCGAACCTGT CGATCATCGA CTCGGCCACC GACAAGCTGG TGCTGCGCCC GCTGCTGGCG
AGCCACAAGC AGGACATCAT CGACCAGGCC AACGAAATCG GCACCGCCGA CTTCGCCAAG
CACATGCCAG AATACTGCGG CGTGATTTCG GTGAACCCGA CCACCCATGC CAAGCGTCAC
CGCATGGAGC ATGAAGAGAA GCAGTTCGAC ATGGCGGTGC TGGAGCGCGC CCTGGAACGC
GCCAAGCTCA TCTCCATCGA CCATGTGATC GACGAGCTGG GCAAGGACGT CGAAATCGAA
GAAGTGACCG AGGCTCTGTC GGGGCAGATC GTCATCGACA TTCGTCACCC TGATGCCCAG
GAAGACGAAC CTCTGGTGCT GGACGGTATC GAAGTCCAGG CCATGCCGTT TTATGCCATC
AACAGCAAGT TCAAGCACCT GGACCCCACG CGCCAGTACT TGCTGTATTG CGACAAGGGT
GTGATGAGCC GTTTGCACGC ACACCACCTG CTCAGTGAGG GACATGCCAA TGTGCGTGTT
TATCGTCCGA CATAA
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| Protein sequence | MKLIVKVFPE ITIKSRPVRK RFIRQLAKNI RNVLKDLDPE LAVDGVWDNL EVVTRIEDEK
VQREMIERLT CTPGITHFLQ VEEYPLGDFD DIVAKCKHHF GHLLAGKHFA VRCKRGGHHD
FTSMDVDRYV GSQLRQQCGA AGIELKKPEV LVRIEIRDQR LYVIHNQHQG IGGYPLGALE
QTLVLMSGGF DSTVAAYQMM RRGLMTHFCF FNLGGRAHEL GVMEVAHYLW KKYGSSQRVL
FISVPFEEVV GEILNKVDNS YMGVTLKRMM LRGAAHMADR LEIDALVTGE AISQVSSQTL
PNLSIIDSAT DKLVLRPLLA SHKQDIIDQA NEIGTADFAK HMPEYCGVIS VNPTTHAKRH
RMEHEEKQFD MAVLERALER AKLISIDHVI DELGKDVEIE EVTEALSGQI VIDIRHPDAQ
EDEPLVLDGI EVQAMPFYAI NSKFKHLDPT RQYLLYCDKG VMSRLHAHHL LSEGHANVRV
YRPT
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