Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5045 |
Symbol | |
ID | 5872860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5636529 |
End bp | 5637098 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550183 |
Product | hypothetical protein |
Protein accession | YP_001671265 |
Protein GI | 167036034 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TAGCCCCCAG CTACCTCAAG CATCAGTTTC TGATCGCCAT GCCGCACATG GCCGATCCGA ACTTCGCCCA GACCCTCACC TACATCGTCG AGCACAATGA GCATGGCGCC ATGGGCCTGG TGGTCAACCG GCCGCAGGAA CTGAGCCTGG CCGACATCCT CGAGCAGCTG CGCCCGGACG AAATGCCGCC GGCCAGCACC TCGCAGGTGC CGATCTACCA GGGCGGCCCG GTGCAGACCG ACCGCGGCTT CGTGCTGCAC AGCAGCGAGT GCAGCTTCCA GGCCACAGTG GCCCTGGAAG GCCTGTCGCT GACCACATCG CAGGATGTGT TGCTTGCGAT TGCCGCAGGG GTAGGCCCGA AACAGAGCCT GATCACCCTG GGTTATGCCG GCTGGGAAGC GGGCCAACTG GAGGCCGAGC TGGCCGACAA CGCCTGGCTG AACTGCCCGT TCGACCCGGA AATCATCTTC GGCATGGCCA ACGACCTGCG CCTGGAAGCT GCAGCCGCCA GCCTGGGGAT CAACCTGCAC CTGCTGACCA GCCAGGCGGG CCACGCCTGA
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Protein sequence | MKTLAPSYLK HQFLIAMPHM ADPNFAQTLT YIVEHNEHGA MGLVVNRPQE LSLADILEQL RPDEMPPAST SQVPIYQGGP VQTDRGFVLH SSECSFQATV ALEGLSLTTS QDVLLAIAAG VGPKQSLITL GYAGWEAGQL EAELADNAWL NCPFDPEIIF GMANDLRLEA AAASLGINLH LLTSQAGHA
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