Gene PputGB1_5045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5045 
Symbol 
ID5872860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5636529 
End bp5637098 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID641550183 
Producthypothetical protein 
Protein accessionYP_001671265 
Protein GI167036034 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TAGCCCCCAG CTACCTCAAG CATCAGTTTC TGATCGCCAT GCCGCACATG 
GCCGATCCGA ACTTCGCCCA GACCCTCACC TACATCGTCG AGCACAATGA GCATGGCGCC
ATGGGCCTGG TGGTCAACCG GCCGCAGGAA CTGAGCCTGG CCGACATCCT CGAGCAGCTG
CGCCCGGACG AAATGCCGCC GGCCAGCACC TCGCAGGTGC CGATCTACCA GGGCGGCCCG
GTGCAGACCG ACCGCGGCTT CGTGCTGCAC AGCAGCGAGT GCAGCTTCCA GGCCACAGTG
GCCCTGGAAG GCCTGTCGCT GACCACATCG CAGGATGTGT TGCTTGCGAT TGCCGCAGGG
GTAGGCCCGA AACAGAGCCT GATCACCCTG GGTTATGCCG GCTGGGAAGC GGGCCAACTG
GAGGCCGAGC TGGCCGACAA CGCCTGGCTG AACTGCCCGT TCGACCCGGA AATCATCTTC
GGCATGGCCA ACGACCTGCG CCTGGAAGCT GCAGCCGCCA GCCTGGGGAT CAACCTGCAC
CTGCTGACCA GCCAGGCGGG CCACGCCTGA
 
Protein sequence
MKTLAPSYLK HQFLIAMPHM ADPNFAQTLT YIVEHNEHGA MGLVVNRPQE LSLADILEQL 
RPDEMPPAST SQVPIYQGGP VQTDRGFVLH SSECSFQATV ALEGLSLTTS QDVLLAIAAG
VGPKQSLITL GYAGWEAGQL EAELADNAWL NCPFDPEIIF GMANDLRLEA AAASLGINLH
LLTSQAGHA