Gene PputGB1_5027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5027 
Symbol 
ID5872842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5614312 
End bp5615388 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID641550165 
Producthypothetical protein 
Protein accessionYP_001671247 
Protein GI167036016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC CCCAGCCTTC GCGCCCACAG CTTGTCTACC TGGCTTTCGG CCCAGCCACC 
TATCATCAGG AAGCCTGCTT CAGCATCATC AGCGCCCTCG CCCAACTGGG CAGCGCAGCC
AGCGACGCCA TAGGCATCCA GGTTTACACC GACAATCCGC AGCCCTACGC CAGCCTGCCC
GTCACCGTGC ACCTGCTGGA CGAGGCCACC CGCCAGGCAT GGAACGCCCC GCACGGTTAT
CACTTTCGCA GCAAGCATGT ACTGCTGCGC CAGGTACTGC AGCAACACCC GCTGGCAGTG
TTGATCGACA CCGACACGTT CTTCCGCACT TCGCCACTGC AACTGTTCGC GCGCGTGGCG
CCCGGCCGCC TACTGTGCAA CGCCATCGGC CCGCGCTATG GCGCCGACCA GAAGTGCCTG
CTGTACAAAA ACCTGCTGAC CATTCTCGGC TCACGGGGCC TGGCCGATTG CCAGATGCCA
CTGATCAACT CCGGGTTGAT CGGCCTTACT GCCGAAGACA GCAACACCCT GGACCGCTCC
ATCGCCATGA TGGACGAGTT CTACCCCTTG GCGCGCGAAG CCTACACCCT CGAGGAGTTC
TGCTTGGCAG TGGCGGCTTA TCGCAAGCTG GAACTGGCCG AGTGCACCGA CGTCATCCAT
CACTACTGGA GCCGCAAGGC GCAGTTCCGC GCCAAGATTC AGGCCTGGCT GCGCAAGCAC
GGCCACGACC CACTGAGCCC GGCAGCGTTG GCCGACGTTA GTTTGGTCAA CGACCAGTTG
CCGCGGCCAC CCACCCTGCA CCGCCTGGGT TACAAGGCAC TGAGCCTGAC GCTGCCCAGC
CAAGAGCGCC AATTCGCCCG CGAATTACTG TATGGCTGCT ACCCCTACCC CAACGAATTC
GACCGTGCCT GCGCGCCGGC CTGGTGGGAC AAGGCCCTGG AAAACCTCAA TGCCCGCCAT
GGCCACATGG AACCCGAGCG ACTGCGACAA TGCCTGCGCC ACCCAGGGTT GCGGTTGTCG
CTGGGTGAGC GGCGCAAGGA TGTCGAGGCG CATCTGCTGC AAACATCGCA AGGCTGA
 
Protein sequence
MQHPQPSRPQ LVYLAFGPAT YHQEACFSII SALAQLGSAA SDAIGIQVYT DNPQPYASLP 
VTVHLLDEAT RQAWNAPHGY HFRSKHVLLR QVLQQHPLAV LIDTDTFFRT SPLQLFARVA
PGRLLCNAIG PRYGADQKCL LYKNLLTILG SRGLADCQMP LINSGLIGLT AEDSNTLDRS
IAMMDEFYPL AREAYTLEEF CLAVAAYRKL ELAECTDVIH HYWSRKAQFR AKIQAWLRKH
GHDPLSPAAL ADVSLVNDQL PRPPTLHRLG YKALSLTLPS QERQFARELL YGCYPYPNEF
DRACAPAWWD KALENLNARH GHMEPERLRQ CLRHPGLRLS LGERRKDVEA HLLQTSQG