| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4973 |
|---|
| Symbol | |
|---|
| ID | 5872788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5547301 |
|---|
| End bp | 5548047 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641550111 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_001671193 |
|---|
| Protein GI | 167035962 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTG TCAAACTGAC TTCCGTGGCC GTGCTGGCAC TCGCTCTAGG CGCCTGCCAG
AGCCTGTTCA CGCCCAACTA CCGGGCTCCG CTCGAGGTCA AGCGCGACGC CTGGGAGCAT
GTCAAACCCG GCTGCAGCGA GCGTGACTGC CCGCTGGTGA ATATCGACAT GGTCCACTTC
CCGGCCCTGC CCAAGCTCGA TGGCATCGTT GAAAAACGCC TGCTGCAATT GACCGAAGAC
AATCAGCATG GCACCGCGCC AAGCACCCTG CAGGCCTACG AACAGCAATA CCTGGCCAAT
GCCGACAAAC GTAACAGCAG CTACTTGCAG GCCAAGGTAC GCGAGCAGCA TGACGGGCTG
GTGATCATCG AGTTGTCCAG CTACCTGGAC AGCGGTGGCG CCCACGGCAT GCCGGGGCGT
GGCTTCATCA ACTACTCGCG CAAGCTGGAC AAGGTACTGA CCCTGCAGGA CATGTTGGTG
CCGGGCCAGG AGGACACCTT CTGGAAAACC GTCGAGGAGT CACACCGCGC CTGGTTGATG
AGCGTGGGCA TGGACAAGGA CGCCGAGTTC GTCAAAACCT GGCCGTTCAA GAAGTCGCCG
CACATCGCCC TGACGTACGG CGCGGTAGTG GTCAAGTACG AGGTCTATGC CATCGCGCCC
TACTCCATGG GCCACGTGGA ATTGAAGATC CCCTACCCAC GCCTCAATGG CGTGCTCAAG
CCTGAGCTGT TTCCCGGCCG CGGCTGA
|
|---|
| Protein sequence | MTLVKLTSVA VLALALGACQ SLFTPNYRAP LEVKRDAWEH VKPGCSERDC PLVNIDMVHF
PALPKLDGIV EKRLLQLTED NQHGTAPSTL QAYEQQYLAN ADKRNSSYLQ AKVREQHDGL
VIIELSSYLD SGGAHGMPGR GFINYSRKLD KVLTLQDMLV PGQEDTFWKT VEESHRAWLM
SVGMDKDAEF VKTWPFKKSP HIALTYGAVV VKYEVYAIAP YSMGHVELKI PYPRLNGVLK
PELFPGRG
|
|---|
| |