| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4939 |
|---|
| Symbol | |
|---|
| ID | 5872754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5510306 |
|---|
| End bp | 5510776 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641550077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001671159 |
|---|
| Protein GI | 167035928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000135969 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCC AACTGGTCGC CGCTCCGGCG GAGCTGGATT TTCTTCATAG CGATGGCATA
AACGTCACTG CGCCAATGAC TGCCATCAAG GCCTATTACG CCATGACCTC GGACGTGCCG
GGCTGGTTGG CTGCAGCCTT CCGCCTGCGC GACTTCATCT CGCGCCGGTT CAACGTCGCT
GCTATCCACG GCTTCTCGTC ACTTAACCCC GAGCGGGCTC CGGTAGTGGG TGGGCTTCTG
GATTTCTTCA CCGTCGAGGC GATCAGCGAC CAGCAACTGG TCCTGACTTC ACGTGACACG
CACTTGGCGG TCATGGTGAG CATGGACCTG GATGAAGCAG AGCAAGGTCG GCAGCGCCTT
AGCGTCACCA CCTCGGTGCA GTGCTTCAAT CGTTTCGGTC GCTACTACAT GCTGCCTGTC
GGCATGGCTC ACGGGCCAAT CGTGCGGCGC ATGCTGCGCA ATATCGCGTG A
|
|---|
| Protein sequence | MSAQLVAAPA ELDFLHSDGI NVTAPMTAIK AYYAMTSDVP GWLAAAFRLR DFISRRFNVA
AIHGFSSLNP ERAPVVGGLL DFFTVEAISD QQLVLTSRDT HLAVMVSMDL DEAEQGRQRL
SVTTSVQCFN RFGRYYMLPV GMAHGPIVRR MLRNIA
|
|---|
| |