| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4887 |
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| Symbol | cbiD |
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| ID | 5872700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5454601 |
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| End bp | 5455695 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641550023 |
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| Product | cobalt-precorrin-6A synthase |
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| Protein accession | YP_001671107 |
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| Protein GI | 167035876 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.151074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAG AGACCCGCGA ACAGCCCGCG CCCCTGCGCA GCGGCCTGAC CACCGGCAGC
TGCGCCACCG CCACCAGCCT GGCGGCCGCT CGCTTGCTGC TGAGCGGCGA AACCAGCGAT
GCCGTCAGCA TTACCTTGCC CAAGGGCAAG GTGGTGCAGA TGCGCCTGGA GTTCTGCCGA
TTAGCCGGCG AAAGCGCCGA AGCCGGCACA CTCAAGGACG CTGGCGACGA CCCGGACGTG
ACCCACGGCG CCCTGCTCTA CAGCCAGGTG CGCTTGCTGG ACGAGCCAAG CATCCGCTTT
GTCGCCGGCA GCGGTGTCGG CACCGTGACC CGGCCGGGGC TGGTGCTTGC GGTGGGTGAG
CCGGCCATCA ACCCGGTGCC GCGCCGCATG ATCAGCGAGC ACCTGCAACG CCTGGCCGAC
GAATGCGGCT ACTTCGGCGG CTTCGAGGTC ACGGTCAACG TGCAGGGCGG CGAACAGCTG
GCACTCAAGA CCATGAACCC GCGCCTGGGC ATCCTCGGCG GGCTGTCGAT CCTCGGCACC
AGCGGCATCG TGCGGCCGTT CTCCTGTGCG GCCTATATCG CCTCGATCCA CCAAGGTATC
GACGTGGCCC ACACCAACGG CTACACGCAT ATCGCCGCCT GCACTGGCAA CGCCAGCGAA
GACACCATGC GCCGGGTCTA CGGCCTGCCG GAAATCGCCC TGATCGAAAT GGGCGACTTT
GTCGGCGCGG TGCTCAAGCA CCTGCGCAAG GTGCCGGTGC CGCGCCTGAC CCTGTGTGGT
GGTTTTGGCA AGATCAGCAA ACTGGCCGCC GGGCACATGG ACCTGCACAG CCGCCATTCC
AGCATCGATC TGCCGCAACT GGCGGGCTGG GCCGCAGACA TTGGTGCTGA CGCAGCGCTG
CAGGCCGCCA TCATCGGCGC CAACACTAGC CAGCAAGCGC TCGCGCTGGC GCATGCGGCC
GGCATTGCCC TCGGGGACGC GGTATGCGCC CACGCCCTGG CGTTCGCCCG CAGCGTGGTG
CCGGCGCAGG TGCAAGTGGA AGTGTTCGCC ATCGACCGCC AAGGCGGTAT CGTTGGCCGG
GCAGGTGTGC AATGA
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| Protein sequence | MREETREQPA PLRSGLTTGS CATATSLAAA RLLLSGETSD AVSITLPKGK VVQMRLEFCR
LAGESAEAGT LKDAGDDPDV THGALLYSQV RLLDEPSIRF VAGSGVGTVT RPGLVLAVGE
PAINPVPRRM ISEHLQRLAD ECGYFGGFEV TVNVQGGEQL ALKTMNPRLG ILGGLSILGT
SGIVRPFSCA AYIASIHQGI DVAHTNGYTH IAACTGNASE DTMRRVYGLP EIALIEMGDF
VGAVLKHLRK VPVPRLTLCG GFGKISKLAA GHMDLHSRHS SIDLPQLAGW AADIGADAAL
QAAIIGANTS QQALALAHAA GIALGDAVCA HALAFARSVV PAQVQVEVFA IDRQGGIVGR
AGVQ
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