| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4872 |
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| Symbol | |
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| ID | 5872685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5437126 |
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| End bp | 5438493 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550008 |
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| Product | Zinc finger-domain-containing protein |
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| Protein accession | YP_001671092 |
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| Protein GI | 167035861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GTTTCGTCAC CCAGTGCCCG CATTGCCAGA CCAGCTTTCG CGTCACCCAC
CACCAGCTGA GCGTGGCCCG TGGCGTGGTG CGCTGCGGTC ACTGCCTGCA GGTGTTCAAC
GCCGCCAAGC AGTTGCTGGA GCAGAACCGT GCCGGTACCG CCAGCGCGGC CGCGGCTGCG
GCACCTGCGC CGGCACCTGC CGCGCCTGCC GAGCCGCTGA TCGAGCCTGC CAGTACCCCT
GAGCCTGCCG TCGAAGTACG CAGCAGTACC CTTGACCAGG ACTGGGCGCT TACCGCCCAG
GCGCTGGACG AGCTTGACCT CGACAAGGAA CTGGAACGCC TGGAGCGTCG CGGCCAAACC
GCCCCGACAC GCCCGGCCAG CCAGGATGAC GGGCTGCAGG CACGGCGCGA CGAACTGCAC
CTGGACGAGC ACGCAGACGA CCTGTTCGGC ACGGCCACCG ATGAGCCCTT CGAGCAGCAG
CACCCGGCAG AGCCCGCCCC AGTATTGCTG CAGCCGGAAC CCCTTGAGCT GGACCTGGGC
CCTGCACCCG GCGAGCGCAC CGAGCCGACC CTGGGCAGCA ACCTTGACCT GGACATCGAA
GACGAGCCGC CCGCGCACCG CGCGGCCGAA ACCGATGAAC AGCCCGCATT CGGCGAACCG
CTGCGCGCCA GCGATGACGA AACCCCGGAA AGAGGCCTGA GTGCCCGTGA CGATGAGCCG
CTGGCGCTGC ACCTGTCGGC GCGCGACGAC GAACCCGTCG AGGTACTGCC CGGGGAGCGC
CTGGAACCGG GCCTTACCGG CAAAGCCGAA CGCCCCTCGC GCAAGGAGCC ACTGGTCGAC
GTGGTCGACG ATCCGCTGCA ATTGGGCTGG GAAAAGCCCG CGCCTAACTG GGGCAAGCGC
CTGCTGTGGG GTTTTCTGAC CCTGCTGGCC GCCGGCCTGC TGGCGTTTCA GTACGTGTGG
TTCCACTTCG ACGAAATGGC CCGCCAGGAC CAGTATCGGC CGATCTTCCA GCAAATCTGC
CCGATGGTCG GCTGCCAGGT ACCCACCCGC GTCGACATTG CCCGTATCAA GAGCAGCAAC
CTGGTGGTGC GTAGCCACCC GGACTTCAAG GGCGCATTGA TCGTCGACGC GATCATCTAC
AACCGCGCAC CCTTCGCCCA GCCGTTCCCG CTGCTGGAGC TGCGCTTCGC CGACCTCAAT
GGCCAGCTGA TCGCCAGCCG TCGCTTCAAG CCCAGCGAGT ACCTGTCCGG CGAACTGGCA
GGGCGTGGCG AAATGCCCAG CCAGACGCCA ATCCACATCG CCCTGGACAT CCTCGACCCG
GGGCCGAAGG CCGTGAATTA CAGCCTGAGC TTCCGTTCGC CGGAATGA
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| Protein sequence | MTDSFVTQCP HCQTSFRVTH HQLSVARGVV RCGHCLQVFN AAKQLLEQNR AGTASAAAAA
APAPAPAAPA EPLIEPASTP EPAVEVRSST LDQDWALTAQ ALDELDLDKE LERLERRGQT
APTRPASQDD GLQARRDELH LDEHADDLFG TATDEPFEQQ HPAEPAPVLL QPEPLELDLG
PAPGERTEPT LGSNLDLDIE DEPPAHRAAE TDEQPAFGEP LRASDDETPE RGLSARDDEP
LALHLSARDD EPVEVLPGER LEPGLTGKAE RPSRKEPLVD VVDDPLQLGW EKPAPNWGKR
LLWGFLTLLA AGLLAFQYVW FHFDEMARQD QYRPIFQQIC PMVGCQVPTR VDIARIKSSN
LVVRSHPDFK GALIVDAIIY NRAPFAQPFP LLELRFADLN GQLIASRRFK PSEYLSGELA
GRGEMPSQTP IHIALDILDP GPKAVNYSLS FRSPE
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