| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4786 |
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| Symbol | |
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| ID | 5872600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5351227 |
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| End bp | 5353320 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641549924 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001671008 |
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| Protein GI | 167035777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCGTG ACGACCCGCC GCTGAAGATT CTCCTGATGT CCGCCACCCT GGAAGGCGAG
CGCCTGTCGC GGTTGCTGGA CGATGCGCCG GTGGTCAGCA GCGAAGGCCG CATGCATCCG
GTGGATATCC GTTGGGGGCG AGCGTTCCAG CCGGGCGAGT TCATCGAACC ACGGGTGGTG
GACAGCGTGC TGCAGGCGCT GGCAGACCAA GCCGGCAGCG TGCTGGTATT CCTGCCTGGG
CAGGCCGAGA TCCGCCGGGT GCACCAGAGC CTGCAGGAGG CCTTGGGCGA TCGGCCCGAA
ATTCTGCTCT GCCCACTGCA TGGCGAACTG GATCTCAATG CCCAGCGTGC CGCCATCGAC
CCGCCGGCCA AGGGCCTGCG CAAGGTGGTG CTGGCCACCA ACATCGCCGA AACCAGCCTG
ACCATCGATG GCGTGCGTGT GGTGATCGAT GCCGGCCTGG CCCGTGTGCC GCGCTTCGAC
CCTGGCAGCG GTATGACCCG CCTGGACACT CAGCGTATCT CCCGCGCCAG CGCCACTCAG
CGCGCCGGCC GGGCCGGCCG CCTGGAGCCC GGCGTGTGCT ACCGCCTGTG GTCCGAAGCC
CAGCATGAGC AACTGGCCGC CCATGGCAGC GCCGAAATCC TCCAGGCCGA CCTGGCCGGG
TTGGCCCTGC AACTGGCGCG CTGGGGCGTT ACCCCCGAGC AGTTGCGCTG GCTTGACCAA
CCGCCGGCTG CCGCGTTCGC CCAGGCCCAA GACCTGTTGG TGCGGCTCAA TGCCTTCAAG
CCTGGTAGCC GTGACAACCT CAGCGAACAC GGCCAGGCCA TGGCCGAACT GCCGGCGCAC
CCACGCATCG CGCATTTGCT GCTGCGTGGC CAGGACCTGG GCCTGGCACA GATGGCCTGC
GATGTGGCTG CGCTGCTGGG GGAGCGGGAT ATCCAGCGTG GGGGTGGTGC GGACTTGCAC
AACCGGCTGG CGCTGGTCAG TGGCGAAAGC AAGGCGGCGC GTGGCGGCCA GGGTGGTGTG
CAGCGGGCGC GTCAGCTGGC CCGCCAGTAC CGTGGTCTGT TGCGAGGCAA GGCCGGTGCG
CCGGTCGCCG ACCCCGACCA CGCGCGCTGG CTGGGCGCGC TTCTGGCGCT GGCCTATCCC
GACCGCGTCG CCCTGCAGCG CCGCGAGGGC GGGGCGGAGT ATCGGTTGGC CAACGGCCGT
GCGGCGCTGT TTGCCGAGGT TGACGCGTTG ATGAAGTGCC CCTGGTTGGT AGTCGCCGAC
CTGGGTAGCC GCCAGGGGCA GCGTGAGGAG CGCATCTACC TGGCCGCCGA ATTCGATCCG
GCGTTGCTCG ATGGCGTGCT GGCCGAGCAG GTCGAGCGGG TCGATATCGT TGATTGGGAC
GAGCGCGAGC AGGTGTTGCG CGCCGAGCGG CAGGTCAAGG TTGGCGAACT GGTCCTCAGC
CGTGAGCCGC TACCCGGCCT GGATGACGAG GCCAAGGCCA GGGCGCTGCT TGGCCTGGTT
CGGCGCAAGG GCCTGAACCT GCTGACCTGG ACGCCGGAAC TGCGCCAGTG GCAGGCACGG
GTGGCACTGC TGCGCCAGCT GGACCTGGAA AAGGATGGCC ACAGCGAATG GCCCGACCTG
GGCGACGAGG CCCTGCTCGC CAACCTGGAA GACTGGCTGC AGCCCTACCT GGGCAAAGTG
TCGCGCCTTA GCCACTTTGC CGCGCTGGAC CTGCCGTCGC TGTTGCGCAA CCTGTTGCCC
TGGCCGCTGC CACAGCGCCT GGACGAACAG GCCCCCGCGC ACCTGGCGGT GCCGTCCGGC
TCGAACATTC GTCTGGACTA CAGCGAGAGC CCGCCGGTCC TCGCCGTGCG CTTGCAAGAG
CTGTTCGGGC TTGCCGACAC CCCACGCATC GCCAACGGCC GGCAGCAGGT CAAGCTGCAC
CTGCTGTCAC CCGCACGCCG GCCGGTGCAG GTGACCCAGG ACTTGGCGAA CTTCTGGCGC
ACCACCTACG CCGAGGTGAA GAAGGATTTG AAGGGGCGGT ATCCGAAGCA TTACTGGCCT
GACGACCCCT TGGTGGCCGA GGCTACGGCG CGAGCCAAAC CTCGGGGGAC CTGA
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| Protein sequence | MLRDDPPLKI LLMSATLEGE RLSRLLDDAP VVSSEGRMHP VDIRWGRAFQ PGEFIEPRVV
DSVLQALADQ AGSVLVFLPG QAEIRRVHQS LQEALGDRPE ILLCPLHGEL DLNAQRAAID
PPAKGLRKVV LATNIAETSL TIDGVRVVID AGLARVPRFD PGSGMTRLDT QRISRASATQ
RAGRAGRLEP GVCYRLWSEA QHEQLAAHGS AEILQADLAG LALQLARWGV TPEQLRWLDQ
PPAAAFAQAQ DLLVRLNAFK PGSRDNLSEH GQAMAELPAH PRIAHLLLRG QDLGLAQMAC
DVAALLGERD IQRGGGADLH NRLALVSGES KAARGGQGGV QRARQLARQY RGLLRGKAGA
PVADPDHARW LGALLALAYP DRVALQRREG GAEYRLANGR AALFAEVDAL MKCPWLVVAD
LGSRQGQREE RIYLAAEFDP ALLDGVLAEQ VERVDIVDWD EREQVLRAER QVKVGELVLS
REPLPGLDDE AKARALLGLV RRKGLNLLTW TPELRQWQAR VALLRQLDLE KDGHSEWPDL
GDEALLANLE DWLQPYLGKV SRLSHFAALD LPSLLRNLLP WPLPQRLDEQ APAHLAVPSG
SNIRLDYSES PPVLAVRLQE LFGLADTPRI ANGRQQVKLH LLSPARRPVQ VTQDLANFWR
TTYAEVKKDL KGRYPKHYWP DDPLVAEATA RAKPRGT
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