| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4773 |
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| Symbol | |
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| ID | 5872587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5339845 |
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| End bp | 5340438 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549911 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001670995 |
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| Protein GI | 167035764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.330372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCC TTGGCGAGGT GCGCAACTGG GTGTTCGACA TGGACGGCAC CTTGACCGTG
GCGGTGCACG ACTTTGCCGC CATTCGCGTG GCGTTGGACA TCCCGGCCGA GCACGACATC
CTCACCCACC TGGCGGCGCT GCCGGCTGAT GAGGCGGCAG CCAAGCATGC CTGGTTGCTG
GAGCACGAGC GGGACCTGGC GGTTGCCTCC ACGGCGGCCA CCGGGGCGGT GGAACTGGTG
CGCGAACTGG CCGAGCGCGG TTGCCGGCTG GGTATTCTTA CCCGCAATGC GCGTGAGCTT
GCGCATGTGA CGCTGGAGGC CATCGGCCTG GCGGACTGCT TCGCGGTGGA GCACATTCTC
GGGCGTGACG AAGCGGCGCC CAAGCCGAGC CCGGATGGGT TACTGAAAAT TGCCAGTGCC
TGGGGCGTGG CGCCCAGTGA GCTGGTGATG GTGGGGGATT ACCGCTTTGA CCTGGACTGT
GGACGGGCGG CGGGGGCGCG CACGGTGCTG GTGAACCTGC CGGATAACCC GTGGCCGGAG
CTGGTGGATT GGCATGCGGC CGATTGCCAG GCATTGAAGG TGATGCTGGG CTGA
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| Protein sequence | MSLLGEVRNW VFDMDGTLTV AVHDFAAIRV ALDIPAEHDI LTHLAALPAD EAAAKHAWLL
EHERDLAVAS TAATGAVELV RELAERGCRL GILTRNAREL AHVTLEAIGL ADCFAVEHIL
GRDEAAPKPS PDGLLKIASA WGVAPSELVM VGDYRFDLDC GRAAGARTVL VNLPDNPWPE
LVDWHAADCQ ALKVMLG
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