Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4740 |
Symbol | |
ID | 5872554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5298977 |
End bp | 5300233 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641549878 |
Product | integrase family protein |
Protein accession | YP_001670962 |
Protein GI | 167035731 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGCAC AAGCTACCCG TCTCTCTGAA CTCAAAGTCA AATCTGCCAA GCCTGCTGAA AAGGACTACG TCCTATTTGA TGGCGGCGGA CTTCAAATGC GAGTGAGAAG CAATGGCTCT AAGCTATGGA ACTTCAATTA CCGACACCCT GTGACGAAGA AGCGGATCAA CATGGGACTG GGAACCTTCC CCGAAGTCTC GTTGGCGCAA GCACGTAAGA GTTCCGTTGA AGCGAGGGAA GCACTTGCCC ACGGCATAGA CCCTAAAGAG AAACGGGATG CTGTGCTGCA AGCTAAACAA GCTGCGACTG AGCACACACT CCAGAATGTG GCGACGTCCT GGTATGAACT GAAGAAGGAT GGTGTGACGC CGGCCTACGC TGAGGACATC TGGCGCTCGC TAACATTGCA CATATTCCCG GACTTGGGCT CCACACCGAT CTCAGCCATC CGCGCACCGC AAGTCATCAA TCTGCTCCGA CCACTCGAAA CCAAGGGTAG CCTTGAAACA GTGAAGCGAC TGACGCAGCG GCTCAACGAG ATCATGACCT ACGGGGTCAA CTCGGGACTG ATTCACGCGA ACCCGCTCAG CGGTATCCGC TCCGTCTTCA AGAAACCGAA AAAGAAAAAC ATGGCGGCTC TACCCCCCGA TGAGCTGAAA GAACTCATGG TGGCAATCGC CAATGCCAGC ATAAAAAGAA CAACCCGCTG CCTGATCGAG TGGCAGCTCC ACACCATGAC CCGGCCAGTC GAGGCAGCAA CCACTCGCTG GGCAGATATC GACATCGAGA AGAAGATCTG GACGATCCCT GCGGAGCGCA TGAAGAAACG CCGAACGCAC ATTGTCCCGC TCACGGAGCA GTCTCTCGCG CTCCTGGAAG CGATCAAGCC CTACAGTGGA CATAGGGAGT ATGTGTTCCC CGCAGACCGA AACCCTCGTA CCCACTGCAA CAGCCAAACC GCCAATATGG CACTGAAACG CATGGGTTTC GAAGGGCGCC TGGTAAGCCA TGGGATGCGC TCTATGGCGA GCACCATCCT CAACGAGCAC GGCTGGGATC CTGAATTGAT CGAGGTTGCG CTTGCCCACG TCGATAAAGA CGAGGTACGT AGCGCGTACA ATCGAGCAGA TTACATAGAA CGCAGACGCC CCATGATGGC GTGGTGGAGC GACCACATCC AGGAAGCTGC TACAGGCAAC CTGTCGGTGT CAGCCATAAG AGAAAATCAA GATAAAAAAG TCATCTCGAT ACGTTGA
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Protein sequence | MCAQATRLSE LKVKSAKPAE KDYVLFDGGG LQMRVRSNGS KLWNFNYRHP VTKKRINMGL GTFPEVSLAQ ARKSSVEARE ALAHGIDPKE KRDAVLQAKQ AATEHTLQNV ATSWYELKKD GVTPAYAEDI WRSLTLHIFP DLGSTPISAI RAPQVINLLR PLETKGSLET VKRLTQRLNE IMTYGVNSGL IHANPLSGIR SVFKKPKKKN MAALPPDELK ELMVAIANAS IKRTTRCLIE WQLHTMTRPV EAATTRWADI DIEKKIWTIP AERMKKRRTH IVPLTEQSLA LLEAIKPYSG HREYVFPADR NPRTHCNSQT ANMALKRMGF EGRLVSHGMR SMASTILNEH GWDPELIEVA LAHVDKDEVR SAYNRADYIE RRRPMMAWWS DHIQEAATGN LSVSAIRENQ DKKVISIR
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