Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4667 |
Symbol | |
ID | 5872475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5204754 |
End bp | 5205245 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549800 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001670889 |
Protein GI | 167035658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.411454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.153114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATACAGG CTTTACGTTT CCCGCTGTGG GCCTTGTTGC TCGCCGTGCT GGCACTGTCT GGCTGCCAGA CCGCCCCTCC CAAGGGCCTT ACCCCCGAAC AGATTGCCGT GCTCAAGCGC GAGGGATTTA CCCCGACCGA CGAAGGCTGG GCGTACGACT TGTCTGGCAA GGTGCTGTTC GGCAGTGACC TGGACAGCCT CAACGGCCAG AGCCAGTCGA TTGTCGAGCG CATTGGCAAG GCACTGCTCA GCGTTGGCAT CCAGGGCGTG CGGGTGGACG GGCACGCCGA CGCCTCGGGC AAGGCGGCGT ATAACCAGCA ATTGTCCGAA CGCCGCGCTC AGAGCGTGAC CAAGGCGCTG GTCGGGGTCG GCATGCAGCC GCAGAACATC CAGAGCCGTG GCCTGGGCAG TACCCAGCCG GTGGCGGACA ACCGCACCAG TGCCGGGCGT ACCGAGAACC GGCGCGTGTC TATCGTGGTG GCGTCTTACT GA
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Protein sequence | MIQALRFPLW ALLLAVLALS GCQTAPPKGL TPEQIAVLKR EGFTPTDEGW AYDLSGKVLF GSDLDSLNGQ SQSIVERIGK ALLSVGIQGV RVDGHADASG KAAYNQQLSE RRAQSVTKAL VGVGMQPQNI QSRGLGSTQP VADNRTSAGR TENRRVSIVV ASY
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