Gene PputGB1_4667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4667 
Symbol 
ID5872475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5204754 
End bp5205245 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID641549800 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001670889 
Protein GI167035658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.411454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.153114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACAGG CTTTACGTTT CCCGCTGTGG GCCTTGTTGC TCGCCGTGCT GGCACTGTCT 
GGCTGCCAGA CCGCCCCTCC CAAGGGCCTT ACCCCCGAAC AGATTGCCGT GCTCAAGCGC
GAGGGATTTA CCCCGACCGA CGAAGGCTGG GCGTACGACT TGTCTGGCAA GGTGCTGTTC
GGCAGTGACC TGGACAGCCT CAACGGCCAG AGCCAGTCGA TTGTCGAGCG CATTGGCAAG
GCACTGCTCA GCGTTGGCAT CCAGGGCGTG CGGGTGGACG GGCACGCCGA CGCCTCGGGC
AAGGCGGCGT ATAACCAGCA ATTGTCCGAA CGCCGCGCTC AGAGCGTGAC CAAGGCGCTG
GTCGGGGTCG GCATGCAGCC GCAGAACATC CAGAGCCGTG GCCTGGGCAG TACCCAGCCG
GTGGCGGACA ACCGCACCAG TGCCGGGCGT ACCGAGAACC GGCGCGTGTC TATCGTGGTG
GCGTCTTACT GA
 
Protein sequence
MIQALRFPLW ALLLAVLALS GCQTAPPKGL TPEQIAVLKR EGFTPTDEGW AYDLSGKVLF 
GSDLDSLNGQ SQSIVERIGK ALLSVGIQGV RVDGHADASG KAAYNQQLSE RRAQSVTKAL
VGVGMQPQNI QSRGLGSTQP VADNRTSAGR TENRRVSIVV ASY