Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4627 |
Symbol | |
ID | 5872435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5164523 |
End bp | 5165041 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641549760 |
Product | cytochrome B561 |
Protein accession | YP_001670849 |
Protein GI | 167035618 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.176901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGGC TGTGGGATCC CCTCCTGCGG CTGTGCCACC TGTCGATCGC AGCGGTGTTC TTCGCCAACT ACTTTTTCAA CGAAGAGGGC GATGACTGGC ACCAGTGGCT GGGCTACTAC GCACTGGCGT GCGTCGTGGT GCGCGTGGTC TGGGGCTTTG TCGGGCCAGC CAGTGCGCGC TGGGCCGACT TCTGGCCAAC CCCGGCACGC GTGGCCGGGC ACGCGCGCAA GGTGCTGCGT GGGGAGCCTT GCCATCGTCT GGGGCACTCG CCGATTGGCG CCTTGGTGAT GCTGTTGATG CTGGCGGGTA TCGCTGGCCT GGGCCTGACT GGTTGGGCGT CGCAGGAAGT GGATGCACTG TGGGGCGCCG ATTGGCCGAC CGACCTGCAC GGTTGGTTGG CCAATGCGGT GCTGGCGCTG GTGTGTGTGC ATGTGCTGGC GGCCATCTAC GAAAGCGTGC TGCTGCGCGA AAACTTGCCG TTGTCGATGA TCACCGGGCG CCGGCGGCGT CGTGATTGA
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Protein sequence | MVRLWDPLLR LCHLSIAAVF FANYFFNEEG DDWHQWLGYY ALACVVVRVV WGFVGPASAR WADFWPTPAR VAGHARKVLR GEPCHRLGHS PIGALVMLLM LAGIAGLGLT GWASQEVDAL WGADWPTDLH GWLANAVLAL VCVHVLAAIY ESVLLRENLP LSMITGRRRR RD
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