Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4615 |
Symbol | |
ID | 5872423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5153785 |
End bp | 5154720 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549748 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001670837 |
Protein GI | 167035606 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAC AGGGACGTAG TCCGGTTATC GATGCCAGCT TCGAGCAGCA GGAGCTGTTT CCGATTCGTG AAGTTTCCCG CCTGACTGGC GTCAACGCCG TGACCCTGCG TGCCTGGGAG CGCCGCTATG GCCTGATCCA GCCAATTCGC ACCGACAGTG GCCACCGCCT GTACTCACAG GCCGACATCG ACGAGGTCCG CCGTATCCTT GGCTGGCTGG AGCGCGGTGT GTCGGTCAGC AAGGTGGGTA GTATTCTCGC GCGAGGCCAT GCCCTTGCCG GGCAGGCGGG TGGCGCGACA GATGCCTGGC AGCGTTGGCA GCACCAGATT CGTCTAGCGG TGCAGAGCTT CGATCTGGCA GGCCTGGATC GCCTTTACGA GATGGTATTT GCCGCCAGCA CCCTGGATCA GGTTTTCGCC GAAGTGTTCA TGCCTGTGTG GCACGACATG GCCGTGCGGC AAGGCGGCTA CGGGCAGACC AGTGAATGGC TGTTCCTTGA CCAGTTCCTG CGCGGTCGGG TGTTCGCCCG TCTGCAGCTT GCCCATGTGC CGCGCAGCCG TAACGTGTTG TTGGCGCCAT TGCCGGGGCA GTGTCATGAA CTTGAGTTGC TGGTAACCAG CCTGCTCCTG AGCAGCGAGG AAACAGGTGT GACCCTACTG GCGAGCGGGC AGCCGCTGCG AGAACTGGCG TTGGTCTGCG AACGTCTGAG GCCGGACGCT CTGGTGCTGT TTTCTCATCA GGCACCGACA GCAGAAACTA CCCGGCACGT TACGCGCCTG GCGGCGATGC TGGAATGCCC GTTGTTGCTG GCCGGCGAAG CGGCGGAAGT GGCACAGGAG AGCTTGGCTG GCAGCCTTGT CGCTTGCCTG GGGGCGCAAG GTAGTGTGAT GCGCCAGCGT TTGCGGCAGT TCCTGGCCGG TCAGCTCGAT ACCTGA
|
Protein sequence | MNEQGRSPVI DASFEQQELF PIREVSRLTG VNAVTLRAWE RRYGLIQPIR TDSGHRLYSQ ADIDEVRRIL GWLERGVSVS KVGSILARGH ALAGQAGGAT DAWQRWQHQI RLAVQSFDLA GLDRLYEMVF AASTLDQVFA EVFMPVWHDM AVRQGGYGQT SEWLFLDQFL RGRVFARLQL AHVPRSRNVL LAPLPGQCHE LELLVTSLLL SSEETGVTLL ASGQPLRELA LVCERLRPDA LVLFSHQAPT AETTRHVTRL AAMLECPLLL AGEAAEVAQE SLAGSLVACL GAQGSVMRQR LRQFLAGQLD T
|
| |