| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4550 |
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| Symbol | |
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| ID | 5872358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5084706 |
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| End bp | 5085803 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549683 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001670772 |
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| Protein GI | 167035541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGCCC ATGTTTTCAA ACCCGATATG CCGCCACCGG TGAAAACCGT CGGCGTGCTC
GCATGGATGC GTGCCAATCT GTTCTCCAGC TGGCTCAACA CGTTGTTGAC CCTGTTTGCC
CTGTACCTGG TGTGGCTGAT CGTGCCGCCG TTGCTGCAGT GGGCGTTGAT CGACGCCAAC
TGGGTCGGCA CCACCCGCGC CGACTGCACC AAGGAGGGCG CCTGCTGGGT GTTCGTGCAG
CAGCGCTTCG GCCAGTTCAT GTACGGCTAC TACCCGGCGG AGCTGCGCTG GCGCGTGGAC
CTGACCGTGT GGCTTGCCGT GCTCGGTGCC GCCCCGCTGT TCATCAAGCG CTTCCCGCGC
AAGGCCTTCT ATGGCCTGGG CTTCCTGGTG CTGTACCCGG TTTTGGCCTA CACCCTGCTG
CACGGGGGCT ACCTGGGCCT GGATAGCGTG CCGACCAGCC AATGGGGCGG GCTGATGCTG
ACCCTGGTGA TCGCCACCGT GGGTATCGTC GGTGCCTTGC CGCTGGGCAT CCTGCTGGCC
CTGGGCCGGC GTTCGCGGAT GCCAGCCGTG AAGGTGGTGT GCGTGACCTT CATCGAGTTC
TGGCGCGGCG TACCGCTGAT CACCGTGCTG TTCATGTCCT CGGTGATGCT GCCGTTGTTC
CTGCCTGAAG GCATGAGCTT CGACAAGCTG CTGCGGGCGA TGATCGGCGT GATCCTGTTC
CAGTCGGCGT ACATCGCCGA GGTGGTGCGC GGTGGCCTGC AGGCCATCCC CAAGGGCCAG
TACGAAGCCG CTGCGGCCAT GGGCCTGGGC TACTGGCGCT CGATGGGCCT GGTGATCCTG
CCGCAGGCAC TCAAGCTGGT GATCCCCGGC ATCGTCAACA CCTTCATCGC CCTGTTCAAG
GACACCAGCC TGGTGATCAT CATCGGCCTG TTCGACCTGC TGAACAGCGT CAAGCAAGCC
GCCGCTGACC CGGCCTGGCT GGGCATGGCC ACCGAGGGCT ATGTGTTCGC CGCCCTGGTG
TTCTGGGTTT TCTGTTTCGG TATGTCCCGC TACTCCATGC ATCTGGAGCG CAAGCTGGAC
ACTGGCCACA AGCGTTAG
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| Protein sequence | MNAHVFKPDM PPPVKTVGVL AWMRANLFSS WLNTLLTLFA LYLVWLIVPP LLQWALIDAN
WVGTTRADCT KEGACWVFVQ QRFGQFMYGY YPAELRWRVD LTVWLAVLGA APLFIKRFPR
KAFYGLGFLV LYPVLAYTLL HGGYLGLDSV PTSQWGGLML TLVIATVGIV GALPLGILLA
LGRRSRMPAV KVVCVTFIEF WRGVPLITVL FMSSVMLPLF LPEGMSFDKL LRAMIGVILF
QSAYIAEVVR GGLQAIPKGQ YEAAAAMGLG YWRSMGLVIL PQALKLVIPG IVNTFIALFK
DTSLVIIIGL FDLLNSVKQA AADPAWLGMA TEGYVFAALV FWVFCFGMSR YSMHLERKLD
TGHKR
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