Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4542 |
Symbol | |
ID | 5872350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5077517 |
End bp | 5077996 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549675 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001670764 |
Protein GI | 167035533 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCAA GCCTCGATCG CACCGACCGC GCCCTGCTGG CTGCGTTGCA GGACAACGCC CGCCTCACCA TCGCCGAGCT CGCCGACCAG GTGGCGCTGA CCACCTCGCC CTGCTGGCGA CGGGTCAAGC TGCTGGAAGA CAACGGCTAC ATCACCGGCT ACCAGGCCAT CCTCTCGCCC AAGTCGCTGG GGTTTGGCGT GACGGCGTTC GTCAGCATCA TGATGGACTC GCACACCAAG GACATGGCGC TGGCGTTCGA GCAGCGACTG ATGGAAATTC CCGAGATCGT CGCCTGCCAC AACATCTCAG GGCGCTATGA CTTTTTGCTG GAAATTCTGG CGCGGGACCT GGAGTCGTTT GGCGAATTCA CCCGGGAAGT GCTGCAACGG CTGCCGGGGG TGAAGGAGAT CTATTCGAGT TTTTCCTACA AGGCGGTGAA GGAGAAAAGG GTAATACCTG TGTCGGAAAA ACACATCTAA
|
Protein sequence | MPSSLDRTDR ALLAALQDNA RLTIAELADQ VALTTSPCWR RVKLLEDNGY ITGYQAILSP KSLGFGVTAF VSIMMDSHTK DMALAFEQRL MEIPEIVACH NISGRYDFLL EILARDLESF GEFTREVLQR LPGVKEIYSS FSYKAVKEKR VIPVSEKHI
|
| |