Gene PputGB1_4542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4542 
Symbol 
ID5872350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5077517 
End bp5077996 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID641549675 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001670764 
Protein GI167035533 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAA GCCTCGATCG CACCGACCGC GCCCTGCTGG CTGCGTTGCA GGACAACGCC 
CGCCTCACCA TCGCCGAGCT CGCCGACCAG GTGGCGCTGA CCACCTCGCC CTGCTGGCGA
CGGGTCAAGC TGCTGGAAGA CAACGGCTAC ATCACCGGCT ACCAGGCCAT CCTCTCGCCC
AAGTCGCTGG GGTTTGGCGT GACGGCGTTC GTCAGCATCA TGATGGACTC GCACACCAAG
GACATGGCGC TGGCGTTCGA GCAGCGACTG ATGGAAATTC CCGAGATCGT CGCCTGCCAC
AACATCTCAG GGCGCTATGA CTTTTTGCTG GAAATTCTGG CGCGGGACCT GGAGTCGTTT
GGCGAATTCA CCCGGGAAGT GCTGCAACGG CTGCCGGGGG TGAAGGAGAT CTATTCGAGT
TTTTCCTACA AGGCGGTGAA GGAGAAAAGG GTAATACCTG TGTCGGAAAA ACACATCTAA
 
Protein sequence
MPSSLDRTDR ALLAALQDNA RLTIAELADQ VALTTSPCWR RVKLLEDNGY ITGYQAILSP 
KSLGFGVTAF VSIMMDSHTK DMALAFEQRL MEIPEIVACH NISGRYDFLL EILARDLESF
GEFTREVLQR LPGVKEIYSS FSYKAVKEKR VIPVSEKHI