| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4496 |
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| Symbol | |
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| ID | 5872303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5029726 |
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| End bp | 5030568 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549629 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001670718 |
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| Protein GI | 167035487 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.737667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.727724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGA ACGCTGAAGT CGATCAGCTG GTCCGCCAAT CGCAAACCTG GATCCCTTTG
ATCATGGAAT ACGGCAGCCG TGTGCTGCTG GCACTGCTCA CCCTCGCGGT CGGCTGGTGG
ATCATCAACA AAGTCAGCGC CCGCCTCGGC AAGCTGGTTG GCCTGCGCAA CGCCGACCTG
GCGCTGCAGG GTTTTATCAG TACCCTGGCG AACATCGTGC TGAAGGTGCT GCTGATGGTC
AGCGTGGCCT CGATGATCGG CATCGAGACC ACCTCGTTCG TTGCCGCCAT CGGTGCCGCA
GGCCTGGCCA TCGGCTTGGC CTTGCAAGGT AGCCTGGCGA ACTTCGCCGG CGGTGTGTTG
ATTTTGATGT TCCGCCCGTT CCGTATCGGT GATTGGATCG AGGCGCAGGG TGTTTCCGGC
ACCGTCGACA GCATCCAGAT CTTCCACACC GTGCTGCGCA CCGGTGACAA CAAGACCGTC
ATCATGCCCA ACGGTAGCCT GTCCAACGGC ATCATCACCA ACACCAACCG CCAGCCGACG
CGCAAGGTGG TGTTCGATGT AGGTGTGGAC TACGAGGCCG ACCTGCAGAA GGCCCGCAAT
GTGCTGCTGG CGCTGGCAGA GGACCCGCGT GTGCTGCCTG ACCCTGCACC GCAGGCGGTA
GTGGCGACGT TGGGCGACAG CTCGATTACC GTGTCGCTGC GGTTGTGGAC CAAGACGTCC
GATTACTGGG ACGTGATGTT CATGCTCAAC GAGCATGCGC GTGACCGGTT AAAGGCCGAA
GGGATCGACA TTCCGTTCCC GCAGCGGGTG ATTCGTGTGG TGCAGGAGAC TGCAGCGCAG
TAA
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| Protein sequence | MDLNAEVDQL VRQSQTWIPL IMEYGSRVLL ALLTLAVGWW IINKVSARLG KLVGLRNADL
ALQGFISTLA NIVLKVLLMV SVASMIGIET TSFVAAIGAA GLAIGLALQG SLANFAGGVL
ILMFRPFRIG DWIEAQGVSG TVDSIQIFHT VLRTGDNKTV IMPNGSLSNG IITNTNRQPT
RKVVFDVGVD YEADLQKARN VLLALAEDPR VLPDPAPQAV VATLGDSSIT VSLRLWTKTS
DYWDVMFMLN EHARDRLKAE GIDIPFPQRV IRVVQETAAQ
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