| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4359 |
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| Symbol | |
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| ID | 5872166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4880155 |
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| End bp | 4882203 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549493 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001670583 |
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| Protein GI | 167035352 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.503749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTACT CACCGCTTCG CCTCTCCCCC CTTGCCGTCG CGCTCTGGCT GGCTGCGCCG
CCCAGCCAGG CCGTGGAACT CGAACCCCAG GTCATCACCG CCAACCCGTT GGGCAACCGC
CAGCTGGCCG CCCCCAGCAC CGTGCTCGAA GGCGAAAACC TGCTGCAACA ACAGCACGGT
AGCCTCGGTG AAACCCTGAA CAAGCAGCCC GGTGTCGCCT CTACCTGGTT CGGCCCTGGC
GCCAGCCGCC CGGTGATCCG CGGCCTGGAC GGCGACCGCA TTCGCATCCT GCGCAATGGC
GTCGGTGCCC TGGATGCCTC ATCGCTGTCC TATGACCACG CTGTACCGCT GGACCCGGTC
ACCGTTGACC GCGTCGAGAT CGTCCGCGGC CCCGCCGCCT TGCTCTACGG CGGCAACGCC
ATTGGCGGGG TAGTCAACAC GTTCGACAAC CGCATCCCGG ATTCGCCGAT CGAAGGCATC
CACGGTGCCG GTGAACTGCG CTATGGCGGC GCCGATACTA CCCGCAGCAG CGCCGGCAAG
CTGGAGGCCG GCAACGGTGC CTTCGCCCTG CACCTGGACG CCAACAGCCG CCAGTTCAAC
GACCTGCGTA TTCCCGGCTA CGCCCGCAGT GCCAAGGTGC GCGATGCCGA TGAGCCGGGC
AGCAAGCACC GCCTGGAAAA CAGCGACGGC CGCCAGGACG GTGGCGCGGT AGGCGGTGCC
TATCACTGGG ACCACGGTTA CGCCGGCCTG TCGTACAGCC GTTACGACAG CAACTACGGC
TCGGTGGCCG AACCCGGTGT GCGCCTGGAC ATGCAGCAGG ACCACTACGC CTTCGCCTCC
GAGCTGCGCG ACCTTGACGG CCCGTTCAGC TCGGTCAAGG TCGATGCCGG CTACACCGAC
TACGAACACA GCGAAATCGA AGAAGGCGAA GTCCACACCA CCTTCAAGAA CAAAGGCTAC
GAAGCGCGCA TCGAAGCCCG CCACCAACCA CTCGGGCCGG TGGAGGGTGT GGTGGGTGCT
CAGGTCAGCC GCAACGAGTT CTCCGCCCTG GGCGAGGAGG CCTTCGTCCC GCACACCAAT
ACCGACAGCC TGGCGCTGTT CATGCTCGAG CAGTGGCAGG CCACGGAACG CCTGAACCTG
AGCCTGGGCG CACGCATGGA GCACACCCGG ATCGACCCGG ACGCCAAAGG TAACGAAAAC
TTCGTCGACG CCGACAGTGC CAGCAGCTTC AACGCGTTCA GCCTGTCTTC GGGGGCGGTG
TACCAGCTCG ACCCGATCTG GTCGCTGGCC GCCAACCTCG GCTACACCGA GCGCGCGCCA
ACCTTCTACG AGCTGTACGC CAATGGTGCG CACGTGGCCA CCGGCGCCTT TGAAGTCGGC
GATGCCAGCT TGAACAAGGA AAAGGCCATT TCCGCTGACC TGGCGCTGCG CTTCGACAAT
GGCACCCATA AAGGCAGTGT CGGGGTGTTC TATAGCCACT TTCGCAACTA CATCGGCCTG
ATCGGCACCG GCAACACCCG CGAGGGCGGG CATGACCACG ACCACGACGA GGATGACCAC
GACCACGATC ATGGCCATGA GGGCTTCCCG GAATACCAGT ACCAAGGCGT GCGGGCACGC
TTCTACGGCA TCGAGGCCCA GGACCGCTGG CAACTGGTCG AGAACCGTTA CGGCAGCTTC
GCCCTGGAGT TGTCCGGTGA CTACACCCGG GCCAAGAACC TCGACAGTGG CGAGCCGCTG
CCCCGTATCG CCCCACTGCG CCTGAACAGC GGCCTGGTCT GGGAGCTCGA CCGCTGGCAA
GCGCGGGTAG ATGTGCAGCA TGCGGCATCG CAACATCGCA AGCCGGCCAA CGAAACCAGC
ACCGAGGGCT ACACCACACT GGGGGCCAGC GTTGGCTACC GCTTCGAAGT TGGCCAGAGC
CAGTGGCTGG CATTTGTACG CGGTGAAAAC CTGACCGACC AGACCGTGCG CTACGCCAGC
TCGATCCTGC GCGATATCGC GCCGGCGCCG GGGCGGAGTG TGGAGGTCGG GTTGCGTACC
ACCTTCTGA
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| Protein sequence | MLYSPLRLSP LAVALWLAAP PSQAVELEPQ VITANPLGNR QLAAPSTVLE GENLLQQQHG
SLGETLNKQP GVASTWFGPG ASRPVIRGLD GDRIRILRNG VGALDASSLS YDHAVPLDPV
TVDRVEIVRG PAALLYGGNA IGGVVNTFDN RIPDSPIEGI HGAGELRYGG ADTTRSSAGK
LEAGNGAFAL HLDANSRQFN DLRIPGYARS AKVRDADEPG SKHRLENSDG RQDGGAVGGA
YHWDHGYAGL SYSRYDSNYG SVAEPGVRLD MQQDHYAFAS ELRDLDGPFS SVKVDAGYTD
YEHSEIEEGE VHTTFKNKGY EARIEARHQP LGPVEGVVGA QVSRNEFSAL GEEAFVPHTN
TDSLALFMLE QWQATERLNL SLGARMEHTR IDPDAKGNEN FVDADSASSF NAFSLSSGAV
YQLDPIWSLA ANLGYTERAP TFYELYANGA HVATGAFEVG DASLNKEKAI SADLALRFDN
GTHKGSVGVF YSHFRNYIGL IGTGNTREGG HDHDHDEDDH DHDHGHEGFP EYQYQGVRAR
FYGIEAQDRW QLVENRYGSF ALELSGDYTR AKNLDSGEPL PRIAPLRLNS GLVWELDRWQ
ARVDVQHAAS QHRKPANETS TEGYTTLGAS VGYRFEVGQS QWLAFVRGEN LTDQTVRYAS
SILRDIAPAP GRSVEVGLRT TF
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