| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4340 |
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| Symbol | |
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| ID | 5872147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4852335 |
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| End bp | 4856714 |
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| Gene Length | 4380 bp |
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| Protein Length | 1459 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549474 |
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| Product | hypothetical protein |
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| Protein accession | YP_001670564 |
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| Protein GI | 167035333 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.335687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TCCCCAGGCA CGACCTGCCA CCCGACTCGG TAGAGGCACT GATCGCCAGG
CAGTTGCCCG ATTGGTTCAA GCAGGCGCCA GCCGATGCGC TGAAGGAGCT CAACCTTGCT
TTGAGCCGCC AGCAGCAAAG TGTCGACCAG TTGGATCGGT TGTTGAGCGC TATTCCTTGC
TTGGCCAAAT TTGCCGCTCC GCGCCTCGAA GTGGCCTTGC ACAAGGAGCA CAACCGCCAT
ATCGATGTGC GCTCGACGCA GCTGTGCACT GTGGAGCGCA GGTTCTATCC GAGCAGTTTC
CCTATGCCAC CTTCGGTACG GACGGTGCGC ACGAACGCGG TGCCGTTGCT GGCTGCAGCG
ATGCACAATT TCGCTGAGGA TGAAATCGTG GCCAGGCCGG TTGTCCGCCG GCAGGTGGAG
TCGGCGTCAG GCGCCGTGAT GCCCATTTCG TTCGTGTCGT TCGCCAAGCT CTGCCGTAAG
TTGGACCTGG GCGGCCACTA CCAAGGGTTG TTGCGAGAGC ATCTGTTACC CGCTGACGAG
GCGGGCGGCA CGCCGGGCCA TGCTCGGCGT GCTGTCGAGG TTGTGTTTGA AGAGGCGCAG
CGCACGGCAT TGGATGCGGC GGTGCGCATC GCTTTTTTGA AAGCAGACAT CGATGAGCGC
AGCTACCTGC AGATGCTGAG GGTTGTCGCG CCCACGCCGA TCGTACCAGC CGACACCACA
GTGCTTACCT GCAGGCAACT GTTCTTGCTT GGCAAATGCA TCCAGGGTGT GGTGGTGGTC
GAGTGCCGTG AACATGGCGG TGGCGCCCCT TCGGGGCTGA TCGTCTGGAT ACCGGACGAC
GCTGCTCGAC CCGTTCGTCA GCATGCTTCC TGGGCCGCGC TCTACCAGGA TTTAGGGCTG
CGCTTGCGCG AAACACGGTT TGCCAAGTTT TTCATGCGGT TCATTGGCGA GCGCGAGCGT
ATGGCTTTCA GCGCCGTGCT TGAACGCCTT CAGGCCCAGA CCGCGAAAGG AGCCGCACTG
GCACTCGACG GTCGTCATTT TCCTTTGGAC AAACCGCTGT TCGCTCATCT GCGGGCCCAG
CGCATTGACA AGATTTTCGA CGATGCCAGG GTGTTGGCGG TGCCTACCGG AGACGAAGAT
GCCGCCGCTC GCCGCCGGCG GCTCGCCGGC TATGAAAATG CCGGCTTGAC TCTGCTAGGC
CTGGCCGGAT TGTTCGTACC CGTACTGGGC GAGGTGATGT TGGGGATTGC TGCGCTTCAG
ATTGCCGACG AGGTCTACGA AGGCTATCAG GATTGGCAGC TCGGAGACCG TGAGGCTGCC
TTGGGGCATG TGTTTGCGGT CGCGGAAAAC CTGGCGGTGG GTGCGGCGGT GGGCGTCGCG
GCGGCGCAGG TGCAAGCGTT GGTCCCAGTG ATGCTCGATA GCGGGCAATT GAAACTCTGC
TCCTCTGACA TGGCGGCATA CCGGGTGGAG CAACCTCCCG GCTTGTCCAT GGCGCAAAGT
GAGGGGCACC TGGGGCGTTC TCAAGTGCAG TTTCACGAAG GCACTTATCA GATGGCGCGC
TCGCAGGATG GCAAGGACTT GGTAATTCGT CACCCGAAGC GCGAGCAGGC ATATCGACCG
TTACTCGAAC GCAACGGCAG CGGCGGCTGG CGCCATGCGC TGGAGCGGCC TCAGGAATGG
ACGGGAGAGC TGCAACTTCT ACGTCGGCTG GCCGCGGACT TTTTTGACAT GACAGCGGAA
CAGGCGACCG CCGTGCTGGA TTGCACGGGC TTTGACGAGG CACAGCTTCG TCAACTGCAT
GTTGAGCACG CGCCAGCGCC TGCACGGTTG CGGGATGCAT TCGATCGCCA TCGGCTGCAC
ACCCTGCATC CAGCCATTCA GGCCGATGCA TTGGAGTTGC TGGTGGCTGC CGCCCAAGAG
GCCGAGGAAG TGGAAGACGC ATTGATGCGG CGTTCATTTC CGGGGCTTAC CGTTCGCGGC
GCGAAAGAGA TACGCAAGCA GGTCGACAAT CAAGTGCTCG AACGATTGCG TTCTACCGGG
CGAGTTCCAT TGGCCATGGC TGAGCGTATC CGCTGGTTCC TGCATGACAG CCGGTTGGAT
CGCGCCTGCG CCGGTTTTCG TCAACGACAG GCGGTCAATG GTGATACTGA AAAGCTGGCC
ATCGGTTTGG TCCATGAGCT CGCGCCCTGG CCAGAAGCGT TGCGCGTCGA GCTTCGCGTG
GGCTCGGCAC AGGGCACTTT GCTGGGACAA GCAGGTGCAG ACTCGGCAAC AGAGGTGATG
TGCATCGTGC GAGAAGAGCA GGCCTATCGC ATCCATGACC TGACGGTTGA TCCTCGCCCC
GTAGCCGCAC CTACCGACAG CCTGATGCAC GCGCTTCTGT TGTGCATGAG TGACGAGCAG
AAAGTCGCCC TCGGCGGTCC ACTGCTGAAC GAACAGCAAC TGGTCGAACG GCTGGCGGGG
CACGCCCGTA TGCACCGCGA CCTCGCATCA AGGCTAATAG GCCAGGTGCC TATTTCCGGT
GGTGTGCGTC CTCCTGTGCG GTTTGCCGAT GGCCGGCTCG GCTACCCACT CAGTGGCCGG
GGAGAAAGCC GTGGCCAAGC TGCCAGGCGC GGCATTTCGC AGATCTTTCC AACGCTCGAC
GACGCGCAAC TGCAGCAGTA CATGCTCAGC CTGGTTACCG AGCGGGTTGA CCCGTGGTCA
CACTACCAAG CGCTGTTTCA GCAATGGCGT GCCTTGCGTG AGGCCCTGGC GGGTTGGCGA
GCCGGGTATG CAAACATGCT GGACCTTCTA AGGCGCAGCC GGGTGAGCAA CGCGATCCGG
CGTTGCTGGC GCCGCAAGCT TAGACGCCGG GGGGATGGCA GTTATGCGCT GGAAATCAGC
GGCGAACGCG TGGGTAGCCT GCCTGAGCTG CCTGCGGGTA TCAGCTTCGG GCATGTTACT
CGCTTGGCGT TGCGTAACAT GGATCTAGAG AGCATCGACG CTGACTTTTT ACGGCGCTTC
CCGCAGTTGA GGCAGCTTGA TCTGCGCAAT AACCGACTGG TATCGGTACC ACCGGGTATA
GAGCATTTGA CCGAACTTCG CCTGTTGCGT CTGGATAACA ACCAGATCGT GATGACCCCG
GCGGACAGCC GACGCCTTAA TGCGTTGCTC AATCTGGAAA GGATAGAGCT CAATTACAAC
CCGTTGGGCA ATGCTCCGCA GGTAAGGCGG TTATTGAACG TGCGCCAGTT GGGGTTGCGA
GCGGCAAATA TTGAACAGTT GCCCGCAGGC ATTGAGCAAT TGCCTTGGCG CGGTATCGCC
GACTTGCGTG ACAACCGTAT TCGGCAAGTC AATCGCGACC TTGTGGGCCT GCGCGCCCGC
TTGCAGCAAA TGGCGCTGCA CGATAATCCA CTGGATGAAG CCAGTGAGGC ATTGCTGGAG
GAACAACCGG GGCCTTCGAG TGCTGCGCGG CACACGGTTC AACACAACCC TGCCTACCGT
CATCATGGGG ATCTGCAGGC CGAGCAGGCA GAGTGGCTCG TCGGCGCGAC TGGCCCGTTG
CGCACAGAGC GCGAGGCGTT GTGGAGCAAC CTGCGCAGCG AGGTAGGCTC GAATGACTTC
TTCAACTTTT TGCGTGATTT CGCACGCGGT CCGGATTATC GGAAATACCC CGCGTACTAC
CGGGCGAGGG CCTGGGGCAT CATCGAGGCA TGCGAGCAGA ACAGCGAGTT GCGCGAGTTG
TTGTTCGAGC AGGCAGGCGG GCGGGCCACC TGTGAGGACA GGCTGCTGTG GCTGTTCAGC
CAGATGGAAA CGCGTGTGCT GGTTCATCGA CAGACGGCGG GCCTCGCCCA GGGGCAGAGT
GAAGCAGCTT TGATGAGGCT TGGGCGTTCG CTGTATCGCT TGCAACAGGT GGACAGGATC
GCCGCACGCA AACTGGTGTG GCTCAGGGAG GTGAACGCGA ATCATCCGAG AAACCTGGAG
CGAATCGATG ACATCGAAAC CTACCTGGCG TACCGGGTCA GGCTGGCCGG GCTTCTGCAG
TTGCCAGCGC AACCGCTGCG TATGCACTAT GAGCTGGATG CTTTCGTGAC CGTGGAAGAC
ATCAATATCG CCAGGGCTGA AGTGCTGTCT TTGGAGTCCA CCGAGCAACT GGCGCAATCG
TTGGCTGAAC AGGAGTTCTG GCAGCATTAC CTGCGGGAGA GATACGTTGA GCGATTCAGA
GCCTTGGTAG ATGCTCATCG CCAAACGTTG GAAACGTACG AATCACAAGT TGAGACCGGC
GCGCTCGATG AGCAGACGTA CCTGGACCGG TGCAATGAGT TGAAGCGGCT CCTGGAAACG
CAAGAAAGCG CCCTTATCAA GCGTTTGACT GTAGAAGCCT ATGCACGTTG GCCTCTGTAG
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| Protein sequence | MSDFPRHDLP PDSVEALIAR QLPDWFKQAP ADALKELNLA LSRQQQSVDQ LDRLLSAIPC
LAKFAAPRLE VALHKEHNRH IDVRSTQLCT VERRFYPSSF PMPPSVRTVR TNAVPLLAAA
MHNFAEDEIV ARPVVRRQVE SASGAVMPIS FVSFAKLCRK LDLGGHYQGL LREHLLPADE
AGGTPGHARR AVEVVFEEAQ RTALDAAVRI AFLKADIDER SYLQMLRVVA PTPIVPADTT
VLTCRQLFLL GKCIQGVVVV ECREHGGGAP SGLIVWIPDD AARPVRQHAS WAALYQDLGL
RLRETRFAKF FMRFIGERER MAFSAVLERL QAQTAKGAAL ALDGRHFPLD KPLFAHLRAQ
RIDKIFDDAR VLAVPTGDED AAARRRRLAG YENAGLTLLG LAGLFVPVLG EVMLGIAALQ
IADEVYEGYQ DWQLGDREAA LGHVFAVAEN LAVGAAVGVA AAQVQALVPV MLDSGQLKLC
SSDMAAYRVE QPPGLSMAQS EGHLGRSQVQ FHEGTYQMAR SQDGKDLVIR HPKREQAYRP
LLERNGSGGW RHALERPQEW TGELQLLRRL AADFFDMTAE QATAVLDCTG FDEAQLRQLH
VEHAPAPARL RDAFDRHRLH TLHPAIQADA LELLVAAAQE AEEVEDALMR RSFPGLTVRG
AKEIRKQVDN QVLERLRSTG RVPLAMAERI RWFLHDSRLD RACAGFRQRQ AVNGDTEKLA
IGLVHELAPW PEALRVELRV GSAQGTLLGQ AGADSATEVM CIVREEQAYR IHDLTVDPRP
VAAPTDSLMH ALLLCMSDEQ KVALGGPLLN EQQLVERLAG HARMHRDLAS RLIGQVPISG
GVRPPVRFAD GRLGYPLSGR GESRGQAARR GISQIFPTLD DAQLQQYMLS LVTERVDPWS
HYQALFQQWR ALREALAGWR AGYANMLDLL RRSRVSNAIR RCWRRKLRRR GDGSYALEIS
GERVGSLPEL PAGISFGHVT RLALRNMDLE SIDADFLRRF PQLRQLDLRN NRLVSVPPGI
EHLTELRLLR LDNNQIVMTP ADSRRLNALL NLERIELNYN PLGNAPQVRR LLNVRQLGLR
AANIEQLPAG IEQLPWRGIA DLRDNRIRQV NRDLVGLRAR LQQMALHDNP LDEASEALLE
EQPGPSSAAR HTVQHNPAYR HHGDLQAEQA EWLVGATGPL RTEREALWSN LRSEVGSNDF
FNFLRDFARG PDYRKYPAYY RARAWGIIEA CEQNSELREL LFEQAGGRAT CEDRLLWLFS
QMETRVLVHR QTAGLAQGQS EAALMRLGRS LYRLQQVDRI AARKLVWLRE VNANHPRNLE
RIDDIETYLA YRVRLAGLLQ LPAQPLRMHY ELDAFVTVED INIARAEVLS LESTEQLAQS
LAEQEFWQHY LRERYVERFR ALVDAHRQTL ETYESQVETG ALDEQTYLDR CNELKRLLET
QESALIKRLT VEAYARWPL
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