| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4298 |
|---|
| Symbol | |
|---|
| ID | 5872105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4809799 |
|---|
| End bp | 4810275 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641549432 |
|---|
| Product | water stress/hypersensitive response domain-containing protein |
|---|
| Protein accession | YP_001670522 |
|---|
| Protein GI | 167035291 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5608] Conserved secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.541122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GCGCCCGTCT GCTGTTGCTC GGTACGCTGA TGGCATTGCT GACGGGCTGC
GCCAGTTGGG GTGGCGACGA CTGGCGCGAA CCCGAAGTGC ACCTGGTCGA GGTCGAAACG
GTCAAGGCCA GGCTGCTGGA GCAGGAGTTC GTGTTGCACC TGCGGGTCGA CAACCCCAAT
GACAGCCGCC TGTTCATCCG CAACCTGTCG TATGCCGTTC GCCTCAACGA CCTGCTGCTG
GTGCAGGATG AAACCAGCGT ATGGCGCAGC GTGGGCGGGC ACGCCCAGCG CACCTTCAAG
ATCACCGCGC GAACCAACCT GTGGCAGCAC CTCAAGCCAC TGGCCAAGCT GCTACGCAGC
AAGCAGCCGC TGCATTACAC CCTGCAGGGC GAACTGGCGA CCGGGCTGCT CATCCATCGA
GACCTGCACT TATCGCGCAG TGGTGAGATA ATCCCCGGCG ATCACATCCC GGAGTAA
|
|---|
| Protein sequence | MIDRARLLLL GTLMALLTGC ASWGGDDWRE PEVHLVEVET VKARLLEQEF VLHLRVDNPN
DSRLFIRNLS YAVRLNDLLL VQDETSVWRS VGGHAQRTFK ITARTNLWQH LKPLAKLLRS
KQPLHYTLQG ELATGLLIHR DLHLSRSGEI IPGDHIPE
|
|---|
| |