| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4297 |
|---|
| Symbol | |
|---|
| ID | 5872104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4809320 |
|---|
| End bp | 4809796 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641549431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670521 |
|---|
| Protein GI | 167035290 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTCT CGGTCTGCCC TTGTGGCAGT GGCAACCTGC TTGACGCCTG CTGCGGGCAT
TACCATGCCG GCACCCCGGC ACCGGATGCC CAGGCACTGA TGCGCTCACG CTACAGTGCC
TACGTGCTGG GCCTGGTCGA CTACTTGGTG GCCACGACCC TGCCGGCCCA GCAGGCCGAC
CTGGACCGCG CCGCCATGGC AGCCTGGAGC GCCCAAAGCA CCTGGCTGGG CCTGGAGGTA
GAGAGCGCCG AAGTGCTGGG CGGCCAGCCG GAACACGGCT TTGTCACCTT CACCGCACGC
TGGCACGACC AGGACGGCGA TCACCAGCAC CGCGAGCGTT CGGCGTTCGT ACAGCATGCC
GGGCGCTGGT ACTTCATCGA CCCCACGGTC GGGCTGAAGG CCGGGCGCAA CGACCCCTGC
CCCTGCGCCA GCGGGCAGAA GTTCAAGAAG TGCTGCGCCA GTTACGTGGG GAGCTGA
|
|---|
| Protein sequence | MSVSVCPCGS GNLLDACCGH YHAGTPAPDA QALMRSRYSA YVLGLVDYLV ATTLPAQQAD
LDRAAMAAWS AQSTWLGLEV ESAEVLGGQP EHGFVTFTAR WHDQDGDHQH RERSAFVQHA
GRWYFIDPTV GLKAGRNDPC PCASGQKFKK CCASYVGS
|
|---|
| |