Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4294 |
Symbol | |
ID | 5872101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4807162 |
End bp | 4807881 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641549428 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001670518 |
Protein GI | 167035287 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA CGTCGAAGGC GGCATTGCCG CTGTTGGTGG CTGCCAGCCT GCTTGCGGGC TGCGCCACGC ACAGCGATGG CAGCGCGCCA CTCAACCAAA GGACCTGGCC CATCTGCAGC CTGCTGGGCG GCTTGGTCGG TGGTGGCCTG GGCGCCATCG AAAGTTCTAC CTGGGCCGCC GGTGGCGGTG CCCTGGGCGC CATCGCCGGT GGGCTGATTT GCTATGCCCA GGACGGTGAC GAAGACGGCG ACGGTATTTT CGATCGCCGC GACCATTGCC CTGATACCCC GGCCAATACG GCGGTCGACC ACATGGGCTG CCCGTTGAAG GAATACCCTG CCGCGCCACC AGCCACTGTG GCCGAACCGT CGCCCGAGGT GATCATCCTC GATGACAACG GCGCGGTGAT GTTCGCCTTC GATTCCGCCG ACCTGACGCC GGCGGCCCAG CAGCGCCTGC AAGGCCTGGT GGCGAAACTC GATTCACCAA CCGTGGCCAA GGTCCGTGTG ATCGGGCACA CCGACAATGT GGGCTCCGAC AGTTACAACC AGGCGCTCTC CGAACGCCGC GCCAGCAGCG TGGCCGAATA CCTGATTGGC CAGGGCCTGG AGGCGGGCAA GGTCACCAGC CAGGGCCGTG GCGAAAGCGA GCCGGTCACC GACAACGAAA CCGAGGAGGG CCGCGCGCGC AACCGACGGG TGGAGCTGCA CCTCAACTGA
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Protein sequence | MSVTSKAALP LLVAASLLAG CATHSDGSAP LNQRTWPICS LLGGLVGGGL GAIESSTWAA GGGALGAIAG GLICYAQDGD EDGDGIFDRR DHCPDTPANT AVDHMGCPLK EYPAAPPATV AEPSPEVIIL DDNGAVMFAF DSADLTPAAQ QRLQGLVAKL DSPTVAKVRV IGHTDNVGSD SYNQALSERR ASSVAEYLIG QGLEAGKVTS QGRGESEPVT DNETEEGRAR NRRVELHLN
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