| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4289 |
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| Symbol | |
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| ID | 5872096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4800944 |
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| End bp | 4803178 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549423 |
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| Product | Beta-agarase |
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| Protein accession | YP_001670513 |
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| Protein GI | 167035282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGCC GTACCCTGCC CGCCGTTTTC GCCCTGTTGT TCAGCTCGCC CTTGCTGGCC
GGGCAGCAGA CGCTGTTCAG CTTCGTGCGC CCGGCCTCGG TGGTCAATGT GGTGACCGAG
GATGCCGGCA TGCCGCAGTA CAACGCGGAG CAGACGGCCG AGGGCGAGGT GTTGCGGCGT
GTGGTGTTCA ACCCGGCCCA GCGGCCGACG CTGCGCCTGA GCCCGCAAGG CGGGGCGTGG
GACTGGTCCG CCGGGCAGTT CCTGACCTTA CGCCTGCAAA GTGCCATGGA TTGGGCGCTG
ACCGTGGATG TCACGGTGCA AGGCAGCGAT GGCCGCACCT TGACCAGCCG TATCGACCTG
CCGGCCGGCC CCGCGCAAAC CGTGATGGTG CCGCTGACAG CCAGTTCACC GTTGAACCAG
GGCATGCGTG CCGGCCCGCC GATGCCCTGG AACTATGGCG GGCAGCGCCT GCTGCTGACC
AGCAGCGCCG GGGCAGTCGA CCTCAAGCAG GTGGCCTCGG TGAGCCTGAG TATTCCCAAC
CCCAAGGTCG CGCAAAACCT GCTGATCGAG CGAGTCGGCA TTCAGGATGA CGACCAGGCT
TACAAGGCTG CCTACCATGA GCTGATCGAT ACCTATGGCC AGTCCACGCG CGGTAACTGG
CCTGAGAAGG TTACCAATGA CGAACAGCTC AAGGCAGCCG ATACCCGTGA ACAGCAACAG
CTCAAGGGCT GGCTGACAGA GCGCGGCAAA CAGCAGCTGG ACCCTTACGG CGGCCTGTTG
GCCGGGCCGG CGTTCGCCGC CAAAGGCTTC TTCCGCACCG AAAAGCGTGA TGGCCGTTGG
TACTTGGTAA CGCCGGAAGG GCACCCCTTC TATTCCCTGG GGGTAAACGC CGTGGCGGCA
GACGGCGGGC GTACCTATGT CGCTGGGCGT GAAGGCATGT TCAAGGCCCT GCCCGCTGAG
GGCAATGCAC TGGCCGCTTT CTATGGCGAG GGCAATAACG ACGATGGCAA TGCCTCGTCG
CAAGGGCGCA ATTTCAAACA GGGGCGCTGG TTCGACTTCT ATGCTGCCAA CCTTCAACGT
ACCTATGGCA AACCCTGCCC GCCCGCAGTG GAGGGCCAGC CCGCCAACTG CCCACCGCTG
GCGCTGGATG CGGCCCGCTG GCAGACGCAC GCGCTCGACC GCCTGCAGGC CTGGGGTTTC
AACACCATCG GCAACTGGAG CGAGCCTGCC CTTGGTCAGG CCAGGCGCCT GCCATACACC
GTGCCGCTGT CGATCGTGGG CGACTACGCC AGCATCAGTA CCGGCATGGA CTGGTGGGGC
AGCATGCCCG ATCCGTTTGA CCCGCGTTTC GCCATGGCCA CCGAGCGTGC CGTGGCCATT
GCCGCCCGCG ATCACCGTGA CGACCCCTGG CTGATCGGTT ACTTCGCCGA TAACGAGTTG
GCCTGGGCTG CTCCCGGAAG CGACCCCAAA GCCCGTTACG GCCTGGCCTA CGGCACCTTG
CGCTTGACCA CCGACGTGCC GGCCAAGCGC GCATTCCTCA AGCAGTTGCG TGACAAGTAT
CGCAACCAGG AAGGGCTGTC CAAGGCCTGG GGCATCGAGC TGGCCGCCTG GGAACTGATG
GAAGATCCAG GCTTCGAGGC GCCGTTGCCC AACCCGGAGC ACCCGGAAAT CGAACGTGAT
TACCAGCATT TCCAACAGGT ATTTGCCGAG ACCTACTTCA AGACCATTGC CGATTCGTTG
AAGTGGCATG CGCCCAATCA CCTGCTGTTG GGTGGCCGCT ATGCCATCAG CACGCCAGAA
GCGGTCAAAG CCTGTGCAGA GTTCTGCGAT GTGCTCAGCT TCAATTTCTA TACCCTCAAG
CCTCAGGACG GTTACGACTT CGCTCGCCTG GCCGAGTTGG ACAAGCCGGT GCTGGTGTCC
GAGTTCCAGT TCGGCTCGCG CGATCGCGGG CCGTTCTGGC CGGGGCCGCT GGAGTTGGCG
CGGGAAGAGG ATCGCGGCCC GGCCTACGGC AACTTCCTCA AGGCCGCCCT GGCGCAACCG
ATGATCGTTG GCGCCCACTG GTTCCAGTAC CTCGATCAGC CGGCCAGCGG TCGCCTGCTT
GACGGCGAGA ACGGTCACCT TGGACTGGTG GCCATCACCG ATGTGCCGTA CCCAGGGTTT
GTTGACGCCG TGCGCAAAAG CAACCTGCAG GCCATGGGCC AATTGCGAGC GCTGCTGGAG
AAACCGGCGC CCTGA
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| Protein sequence | MVRRTLPAVF ALLFSSPLLA GQQTLFSFVR PASVVNVVTE DAGMPQYNAE QTAEGEVLRR
VVFNPAQRPT LRLSPQGGAW DWSAGQFLTL RLQSAMDWAL TVDVTVQGSD GRTLTSRIDL
PAGPAQTVMV PLTASSPLNQ GMRAGPPMPW NYGGQRLLLT SSAGAVDLKQ VASVSLSIPN
PKVAQNLLIE RVGIQDDDQA YKAAYHELID TYGQSTRGNW PEKVTNDEQL KAADTREQQQ
LKGWLTERGK QQLDPYGGLL AGPAFAAKGF FRTEKRDGRW YLVTPEGHPF YSLGVNAVAA
DGGRTYVAGR EGMFKALPAE GNALAAFYGE GNNDDGNASS QGRNFKQGRW FDFYAANLQR
TYGKPCPPAV EGQPANCPPL ALDAARWQTH ALDRLQAWGF NTIGNWSEPA LGQARRLPYT
VPLSIVGDYA SISTGMDWWG SMPDPFDPRF AMATERAVAI AARDHRDDPW LIGYFADNEL
AWAAPGSDPK ARYGLAYGTL RLTTDVPAKR AFLKQLRDKY RNQEGLSKAW GIELAAWELM
EDPGFEAPLP NPEHPEIERD YQHFQQVFAE TYFKTIADSL KWHAPNHLLL GGRYAISTPE
AVKACAEFCD VLSFNFYTLK PQDGYDFARL AELDKPVLVS EFQFGSRDRG PFWPGPLELA
REEDRGPAYG NFLKAALAQP MIVGAHWFQY LDQPASGRLL DGENGHLGLV AITDVPYPGF
VDAVRKSNLQ AMGQLRALLE KPAP
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