| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4274 |
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| Symbol | |
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| ID | 5872081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4786284 |
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| End bp | 4787171 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549408 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001670498 |
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| Protein GI | 167035267 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.347219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAC AACTACCTTC GCTTGGATTC GCCGGCATCG GCCTGATGGG CCTGCCCATG
TGCCGCCGTC TATTGGCAGC GGGATATCCG CTGACGGTAT GGAACCGTAG CCCAGACAAG
TGTGCCGCCC TGGTCGCTGC CGGCGCGCGC CTGGCCAGCA GCCCGGCCCA ATTGTGCCGC
GACAGCGACA TGGTGCTGCT GTGCCTGGCC GACACAGCAG TGGTGCGCGA GGTGGTGTTC
GGCGAGCAAG GCATTGCCCA GGGCGGGCGC AGCGGCCAGT TGCTGATCGA TTTCTCAAGC
CTGGAACCAA CCGCCACCCG TGAAATGGCA GCCGAACTGG CAGCACTGTG TGGCATGGCG
TGGTTGGATG CGCCGGTATC TGGCGGTACG CCAGGTGCTG AAGCAGGCAC ACTGGCCATC
ATGGTCGGTG GTGAGGTGGC CGACTTGCAG CGTGCACACC CGGTGCTGCA GGTGCTTGGC
CAGCGCGTGA CGCACATGGG GGCGGTAGGC GCGGGCCAGG TGACCAAGGC CTGCAACCAG
ATGATCGTAG CCTGCAATGC CCTGGTGATT GCCGAAGTAG TGGCATTGGC CGAGCAGTCG
GGCGTAGACG CGACACTGAT TGCCGAAGCG CTGGCCGGTG GCTTTGCCGA TTCCAAGCCG
TTGCAGATCC TGGCGCCGCA GATGGCCGAG AGCCGCTTCG AGCCGATCAA GTGGCATGTA
CGCACGCTGC TCAAGGACCT GGATGGCGCG GTCAAGTTCT CCCGTGAGCA AGGCTCGGCG
ACGCCGCTCA GCGGCCTCGC CGCGCAATTG ATGCGCCTGC ACGGTAGCCA GGGTTACCTG
CAAAAAGACC CGGCGACCCT GGTGGAGCTG TACCGCAACA AGGCGTGA
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| Protein sequence | MSSQLPSLGF AGIGLMGLPM CRRLLAAGYP LTVWNRSPDK CAALVAAGAR LASSPAQLCR
DSDMVLLCLA DTAVVREVVF GEQGIAQGGR SGQLLIDFSS LEPTATREMA AELAALCGMA
WLDAPVSGGT PGAEAGTLAI MVGGEVADLQ RAHPVLQVLG QRVTHMGAVG AGQVTKACNQ
MIVACNALVI AEVVALAEQS GVDATLIAEA LAGGFADSKP LQILAPQMAE SRFEPIKWHV
RTLLKDLDGA VKFSREQGSA TPLSGLAAQL MRLHGSQGYL QKDPATLVEL YRNKA
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