| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4225 |
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| Symbol | |
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| ID | 5872029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4725632 |
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| End bp | 4726342 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549356 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001670449 |
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| Protein GI | 167035218 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CCGTCCGCCT GTCCAAACGC CTCATCGAGC AGCTCGGCTG CTCCCGCCGC
GAGGCCGAGC AGTACATTGA AGGAGGCTGG GTTACTGTCG ATGGCGTGGT GGTCGAGCAG
CCGCAGTTCA AAGTCGAACA GCAGCGCGTC GAACTGCTGC CGGGCGCCCG TGCCGAAACC
CTGGAGCCAG TGACCCTGCT GCTGAATCAG CCGGCCGGCG TGGACAGCGA AACCGCTCGT
GCCAGCATGA ACATGGCTAG CCTCAGCGAA GCCCACCGCG AAGGCGTGCG CGCCCTGCAC
GGGCATTTTG CCCGGCAGGA CTGCGTGGCA CCGCTGGAGC GTGGGGCCAG CGGCCTGCAG
GTGTTCACCC AGGACTGGCG GGTAACCCGC AAAGTCGAGG CGGACCTGCG TCGCCTGGAG
CAGGAATTCA TCGTTGAAGT GCGCGGCGAG ACCACGCCTC AGGCGCTGGA GCGCCTGGCG
CGCGGGGCCA CGCGCAATGA CCGCGAGCTG CCCAAGGCCA AGGCCAGTTG GCAGAACGAG
ACCCACCTGC GCATGGTGTT GAAAAACCCA CAACCAGGGC AGATTTCCGA GCTTTGCGCC
TACCTGCGCC TGGAGCTCAT AAGCATGCGC CGCATTCGCC TGGGTGGCGT GTCCATGGGC
AAGCTGCCTT TGGGCCAATG GCGCTACCTG GCCACTACCG AACGTTTCTA A
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| Protein sequence | MSEPVRLSKR LIEQLGCSRR EAEQYIEGGW VTVDGVVVEQ PQFKVEQQRV ELLPGARAET
LEPVTLLLNQ PAGVDSETAR ASMNMASLSE AHREGVRALH GHFARQDCVA PLERGASGLQ
VFTQDWRVTR KVEADLRRLE QEFIVEVRGE TTPQALERLA RGATRNDREL PKAKASWQNE
THLRMVLKNP QPGQISELCA YLRLELISMR RIRLGGVSMG KLPLGQWRYL ATTERF
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