| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4197 |
|---|
| Symbol | |
|---|
| ID | 5871998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4695548 |
|---|
| End bp | 4696666 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641549325 |
|---|
| Product | protein TolA |
|---|
| Protein accession | YP_001670421 |
|---|
| Protein GI | 167035190 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGC GAGAGCCATC CGCCTCGGAA AGCTACTTCT GGCCCAGTGT CTGGGCCATC
GGCCTGCATG TGCTGGTGTT CGCCCTGCTG TTCGTCAGTT TTGCCATGAC GCCTGAGCTG
CCGCCTTCCA AGCCGATCGT TCAGGCTACC CTGTACCAGC TCAAGTCCAA GAGCCAGGCG
ACCACCCAGA CCAATCAGAA GATTGCCGGG GAAGCGAAGA AAACCGCTTC GCGCCAGACC
GAAGTCGAGC AGTTGGAGCA GAAGAAGGTC GAGCAGGAAG CAGTGAAGGC TGCGGAACAA
AAGAAAGCCG ACGCTGCTCA AAAGGCCGAG GAGGCCCGCG AAGCCGCCGA GGCGAAAAAA
GCCGAAGACG CTGCCAAGGC CGCAGAAGCC GCCAAGGCTG CCGAAGCCAA GAAAGCTGCC
GAAGCCAAGA AGGCCGACGA GGCGAAGAAG GCTGCCGAGA AGCAGCAGGC CGACATCGCC
AAGAAGAAGG CCGAGGACGA AGCCAAGAAA AAAGCCGAAG AAGAGGCCAA GAAAGAGGCC
GCTGAAGAGG CGAAGAAACA AGCCGCCGAG GACGCCAAGA AAAAGGCAGC CGAGGAGGCC
AAGAAGAAAG CAGCCGAGGA CGCCAAGAAG AAGGCGGCGG CCGAGGACGC TAAGAAGAAG
GCAGCTGAAG AGGCCAAGAA AAAGGCCGCT GCAGACGCCC AGAAAAAGAA GGCACAGGAA
GCGGCCCGCA AGGCGGCAGA AGACAAGAAA GCCCAGGCCC TGGCCGAGCT GTTGTCCGAC
ACCACCGAGC GGCAGCAGGC GCTGGCCGAC GAGCAGGGTG ACCAGGTGGC CGGCGACTTC
GACGACCTGA TCCGCATGCG CGCGGCCGAG GGCTGGGCGC GTCCGCCTTC CGCGCGCAAG
GGCATGACGG TGGTCCTGCA GATCAACATG TTGCCGGACG GTACCATCAC CAGTGTCAGC
GTGGCCCGTT CCAGTGGTGA CGGCCCGTAT GACAGTTCGG CGGTGGCTGC GGTGAAGAAC
ATTGGTCGTT TGACCGAGAT GCAGGGTATG AAGCCGAGCG ATTTCAACCA ATATCGTTCG
TTCAAGATGA CATTTACACC TGAGGATCTA GCGTTGTGA
|
|---|
| Protein sequence | MQQREPSASE SYFWPSVWAI GLHVLVFALL FVSFAMTPEL PPSKPIVQAT LYQLKSKSQA
TTQTNQKIAG EAKKTASRQT EVEQLEQKKV EQEAVKAAEQ KKADAAQKAE EAREAAEAKK
AEDAAKAAEA AKAAEAKKAA EAKKADEAKK AAEKQQADIA KKKAEDEAKK KAEEEAKKEA
AEEAKKQAAE DAKKKAAEEA KKKAAEDAKK KAAAEDAKKK AAEEAKKKAA ADAQKKKAQE
AARKAAEDKK AQALAELLSD TTERQQALAD EQGDQVAGDF DDLIRMRAAE GWARPPSARK
GMTVVLQINM LPDGTITSVS VARSSGDGPY DSSAVAAVKN IGRLTEMQGM KPSDFNQYRS
FKMTFTPEDL AL
|
|---|
| |