| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4196 |
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| Symbol | tolB |
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| ID | 5871997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4694250 |
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| End bp | 4695521 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549324 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001670420 |
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| Protein GI | 167035189 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGCT GCGTGGCAGG CATGGCGGTG GCAGAGGAAA AGAACATCCT GGTCACCAGT
GGCAGTGACC GGGCTACACC CATCGCGGTA GTGCCGTTCG GCCTGCAGGG CGGCAGCGTG
CTGCCCGAAG ACATCGCCGA CATCATCGGC AACGACCTGC GCAACTCTGG TTACTACTCG
CCGATTCCGC GGCAGAACAT GATCAGCCAG CCGTCGCAGG CCAGCGAAGT GATCTTCCGT
GACTGGAAAG CGCTGGGTGC CCAGTACGTG ATGGTCGGCA GCATCGTGCC GTCGGGCGGT
CGCCTGCAGG TGCAGTACGC GCTGTTCAAC GTCGCCACCG AGCAGCAAGT GCTGACCGGT
AGCGTGGCGG GCAGCACCGA CCAGCTGCGC GACATGGCGC ACTACATTGC CGACCAGTCG
TTCGAGAAGC TCACCGGCAT CAAGGGGGCG TTCTCTACCC GCATGCTGTA CGTGACGGCC
GAGCGCTTCT CCACCAACAA CACCCGTTAC ACCCTGCAGC GTTCGGACTA CGACGGTGCG
CGTGCGGTAA CCCTGCTGCA GTCGCGTGAA CCAATCCTGT CGCCGCGCTT TGCGCCGGAT
GGCAAGCGTA TCGCCTACGT TTCGTTCGAG CAGAAGCGCC CGCGTATCTT CATTCAGAAC
ATCGATACCG GTCGCCGCGA GCAGGTGACC AACTTCGAAG GCCTGAACGG CGCGCCAGCC
TGGTCGCCGG ACGGTTCGCG CCTGGCGTTC GTGCTGTCCA AGGACGGCAA CCCGGACATC
TACGTGATGA ATGTGGCTTC GCGCCAGATC AGCCGTGTGA CTGCCGGCCC AGGTATCAAT
ACCGAGCCGT TCTGGGGTAA GGATGGCAAC ACCCTTTACT TCACTTCCGA CCGTGGCGGC
AAACCGCAGA TCTATAAACA GTCGGTCAGT GGTGGCGGTG CCGAGCGTGT AACGTTCGTG
GGTAACTACA ACGCCAACCC GAAACTTTCG GCAGACGAAA AGACCCTGGT GATGATCCAT
CGCCAACAGG GCTTTACCAA CTTCAAAGTG GCGGCACAGG ACTTGCAGCG CGGAAGTGTA
AAGATTCTGT CTGAAACAAG TCTTGATGAG TCTCCCACTG TCGCGCCAAA CGGCACCATG
CTAATCTACG CCACCCGCCA GCAGGGCCGG GGAGTCTTGA TGCTCGTGTC GCTTAATGGC
CGCGTGAGGC TCCCACTTCC TACCGCTCAA GGCGAAGTCA GAGAACCGTC CTGGTCCCCT
TACCTGAACT GA
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| Protein sequence | MLCCVAGMAV AEEKNILVTS GSDRATPIAV VPFGLQGGSV LPEDIADIIG NDLRNSGYYS
PIPRQNMISQ PSQASEVIFR DWKALGAQYV MVGSIVPSGG RLQVQYALFN VATEQQVLTG
SVAGSTDQLR DMAHYIADQS FEKLTGIKGA FSTRMLYVTA ERFSTNNTRY TLQRSDYDGA
RAVTLLQSRE PILSPRFAPD GKRIAYVSFE QKRPRIFIQN IDTGRREQVT NFEGLNGAPA
WSPDGSRLAF VLSKDGNPDI YVMNVASRQI SRVTAGPGIN TEPFWGKDGN TLYFTSDRGG
KPQIYKQSVS GGGAERVTFV GNYNANPKLS ADEKTLVMIH RQQGFTNFKV AAQDLQRGSV
KILSETSLDE SPTVAPNGTM LIYATRQQGR GVLMLVSLNG RVRLPLPTAQ GEVREPSWSP
YLN
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