| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4114 |
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| Symbol | |
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| ID | 5871914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4596270 |
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| End bp | 4597661 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549242 |
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| Product | GABA permease |
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| Protein accession | YP_001670340 |
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| Protein GI | 167035109 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.7767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCG CGAGTGGCGC CGGCAATCAG CTGGCGCAAG GCTTCAAGCA ACGCCATGTG
ACCATGCTCT CCATCGCCGG GGTGATCGGT GCCGGGTTGT TCATCGGCTC CGGGCACGCC
ATCGCCGCGG CCGGCCCCTC GGCCATCGTC GCCTACGCCT TGGCAGGTGC ATTGGTGGTA
CTGGTGATGC GCATGCTCGG GGAAATGGCA GTCGCCAGCC CCGATACCGG CTCGTTCTCC
ACCTACGCCG ACCGCGCCAT CGGCCGCTGG GCCGGCTTTA CCATCGGCTG GCTGTACTGG
TGGTTCTGGG TGCTGGTGAT TCCCATCGAA GCCATCGCCG CTGGCGTGGT GCTCAACAAC
TGGTTCCCGC ACATCGATGC CTGGTTCTTT GCCCTGAGCA TGACCGTGCT GCTGACCGCG
ACCAACCTGT TCAGTGTGGC CAAGTACGGC GAATTCGAAT TCTGGTTCGC CATGCTCAAG
GTCATTGCCA TCGTCGCGTT CATCGCCCTG GGGGCAGCGG CGCTGGCCGG TGTGTTGCCA
GGGCGTGAAG TCAGTGGGCT GCCACGGTTG CTGGAGCAGC AGGGCGGGTT TATGCCCAAT
GGCTGGACGG CGATTATCGG CGCCTTGCTG ACCACCATGT TCAGTTACCT GGGTACCGAG
GCGGTGACCA TTGCCGCCTC CGAATCGAAA GACCCGGCAC GCAACATCGC CAAGGCTACC
CGTTCGGTCA TCTGGCGCAT CAGCGTGTTC TACCTGCTTT CGATCTTCGT GATCATCTCG
GTGGTGCCAT GGAACGACCC GCTGCTGCCC GTGCAGGGCT CCTACCAGCG AGCGCTGGAA
ATCATGAGCA TCCCCTACGC CAAGCAGTTG GTGGACATCG TCGTGCTGGT GGCGGTGGCC
AGCTGCCTGA ACTCGTCGAT CTACATCTCG TCGCGGATGC TCTACTCGCT GAGCAAGCGT
GGCGATGCAC CGGGCTTCAT CCAGCGCACC TCGAAGGTTG GCGTACCGCG TGCGGCGGTG
ATTGGCAGTA CGCTGATCGG CATGTTGGCG ACCATCGTCA ACTACTTTGC CCCGGCTGAG
GTGTTCGCCT TCCTGCTGGC CAGCTCCGGT TCGATTGCCT TGCTGGTGTA TCTGGCGATT
GCGTGCTCGC AACTGCGCAT GCGCGCGATC CTGCAGCGGC AGAATGTCGA GATCGCTTTC
CGTATGTGGC TGTACCCGTG GCTGACCTAT GCAGTCATCG GCTTCATCAT CTTTGCCCTG
GGCACCATGT TTGTCATGCC CAAGCACCGC ATGGAGGTGT CGCTGACTCT GGCACTGGCG
CTGGTGATTC TGGTGCTGGG GGTGGTTACC AGCAAACGGC ATGCGCGGCG GGAGGCCTTG
GCAACCGCGT AA
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| Protein sequence | MTSASGAGNQ LAQGFKQRHV TMLSIAGVIG AGLFIGSGHA IAAAGPSAIV AYALAGALVV
LVMRMLGEMA VASPDTGSFS TYADRAIGRW AGFTIGWLYW WFWVLVIPIE AIAAGVVLNN
WFPHIDAWFF ALSMTVLLTA TNLFSVAKYG EFEFWFAMLK VIAIVAFIAL GAAALAGVLP
GREVSGLPRL LEQQGGFMPN GWTAIIGALL TTMFSYLGTE AVTIAASESK DPARNIAKAT
RSVIWRISVF YLLSIFVIIS VVPWNDPLLP VQGSYQRALE IMSIPYAKQL VDIVVLVAVA
SCLNSSIYIS SRMLYSLSKR GDAPGFIQRT SKVGVPRAAV IGSTLIGMLA TIVNYFAPAE
VFAFLLASSG SIALLVYLAI ACSQLRMRAI LQRQNVEIAF RMWLYPWLTY AVIGFIIFAL
GTMFVMPKHR MEVSLTLALA LVILVLGVVT SKRHARREAL ATA
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